RNA–Protein interactions for RNA: YPL194W

DDC1, Transcript of DNA damage checkpoint protein, yeastyeast

Gene DDC1, Length 1,839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDC1YPL194W DRS1P32892 752 aaKnown RBP11.24□□□□□ -0.61
DDC1YPL194W TFA1P36100 482 aa10.74□□□□□ -0.69
DDC1YPL194W RQC2Q12532 1038 aaKnown RBP10.46□□□□□ -0.74
DDC1YPL194W BFR2Q06631 534 aaKnown RBP10.33□□□□□ -0.76
DDC1YPL194W TAF7Q05021 590 aa10.32□□□□□ -0.76
DDC1YPL194W MTC1P47018 478 aaKnown RBP9.79□□□□□ -0.84
DDC1YPL194W AVT3P36062 692 aa9.41□□□□□ -0.9
DDC1YPL194W DMA1P38823 416 aa9.39□□□□□ -0.91
DDC1YPL194W LEO1P38439 464 aa9.33□□□□□ -0.92
DDC1YPL194W DIP2Q12220 943 aaPredicted RBP9.11□□□□□ -0.95
DDC1YPL194W LEU3P08638 886 aa8.69□□□□□ -1.02
DDC1YPL194W NAP1P25293 417 aaKnown RBP8.66□□□□□ -1.02
DDC1YPL194W URN1Q06525 465 aaKnown RBP8.61□□□□□ -1.03
DDC1YPL194W IFH1P39520 1085 aa8.6□□□□□ -1.03
DDC1YPL194W IOC4Q04213 475 aa8.59□□□□□ -1.03
DDC1YPL194W AIM44Q99299 758 aa8.58□□□□□ -1.04
DDC1YPL194W DMA2P53924 522 aa8.56□□□□□ -1.04
DDC1YPL194W ABP1P15891 592 aaKnown RBP8.5□□□□□ -1.05
DDC1YPL194W SAS10Q12136 610 aaPredicted RBP8.46□□□□□ -1.06
DDC1YPL194W PTP3P40048 928 aa8.45□□□□□ -1.06
DDC1YPL194W RLF2Q12495 606 aa8.42□□□□□ -1.06
DDC1YPL194W ORC1P54784 914 aaPredicted RBP8.4□□□□□ -1.07
DDC1YPL194W RPN1P38764 993 aaKnown RBP8.31□□□□□ -1.08
DDC1YPL194W YRB30P53107 440 aaPredicted RBP8.19□□□□□ -1.1
DDC1YPL194W RSE1Q04693 1361 aaKnown RBP8.18□□□□□ -1.1
DDC1YPL194W TOP1P04786 769 aa8.11□□□□□ -1.11
DDC1YPL194W SSP1P38871 571 aa8.11□□□□□ -1.11
DDC1YPL194W CKB1P43639 278 aa8.1□□□□□ -1.11
DDC1YPL194W YML020WQ03722 664 aa8.08□□□□□ -1.12
DDC1YPL194W SNU71P53207 620 aaKnown RBP8.06□□□□□ -1.12
DDC1YPL194W NOP8Q08287 484 aaPredicted RBP8.04□□□□□ -1.12
DDC1YPL194W BRL1P38770 471 aa7.9□□□□□ -1.14
DDC1YPL194W SLX8P40072 274 aa7.9□□□□□ -1.14
DDC1YPL194W NOP7P53261 605 aaKnown RBP7.88□□□□□ -1.15
DDC1YPL194W SPB4P25808 606 aaPredicted RBP7.86□□□□□ -1.15
DDC1YPL194W RIM101P33400 625 aa7.86□□□□□ -1.15
DDC1YPL194W ATG36P46983 293 aa7.8□□□□□ -1.16
DDC1YPL194W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.8□□□□□ -1.16not detected
DDC1YPL194W RPL17AP05740 184 aaKnown RBP7.79□□□□□ -1.16
DDC1YPL194W KIN1P13185 1064 aa7.79□□□□□ -1.16
DDC1YPL194W GEF1P37020 779 aa7.79□□□□□ -1.16
DDC1YPL194W RPL17BP46990 184 aaKnown RBP7.79□□□□□ -1.16
DDC1YPL194W SWE1P32944 819 aa7.78□□□□□ -1.16
DDC1YPL194W NUG1P40010 520 aaKnown RBP7.78□□□□□ -1.16
DDC1YPL194W SSA1P10591 642 aaKnown RBP7.78□□□□□ -1.16
DDC1YPL194W HGH1P48362 394 aaKnown RBP7.77□□□□□ -1.17
DDC1YPL194W MRX12P47084 519 aa7.76□□□□□ -1.17
DDC1YPL194W BRN1P38170 754 aa7.73□□□□□ -1.17
DDC1YPL194W FAR11P53917 953 aa7.72□□□□□ -1.17
DDC1YPL194W LAM6Q08001 693 aa7.72□□□□□ -1.17
DDC1YPL194W MAM3Q12296 706 aa7.72□□□□□ -1.17
DDC1YPL194W YLR271WQ06152 274 aa7.71□□□□□ -1.17
DDC1YPL194W PAM1P37304 830 aaKnown RBP7.71□□□□□ -1.18
DDC1YPL194W MET10P39692 1035 aa7.7□□□□□ -1.18
DDC1YPL194W SUB2Q07478 446 aaKnown RBP7.7□□□□□ -1.18
DDC1YPL194W YAH1Q12184 172 aaKnown RBP7.7□□□□□ -1.18
DDC1YPL194W OXP1P28273 1286 aa7.69□□□□□ -1.18
DDC1YPL194W MDG1P53885 366 aa7.69□□□□□ -1.18
DDC1YPL194W SUB1P54000 292 aaKnown RBP7.69□□□□□ -1.18
DDC1YPL194W KRI1P42846 591 aaKnown RBP7.68□□□□□ -1.18
DDC1YPL194W YTA7P40340 1379 aa7.68□□□□□ -1.18
DDC1YPL194W ASF1P32447 279 aa7.68□□□□□ -1.18
DDC1YPL194W SPT21P35209 758 aa7.68□□□□□ -1.18
DDC1YPL194W SPC42P36094 363 aa7.68□□□□□ -1.18
DDC1YPL194W MGA2P40578 1113 aa7.68□□□□□ -1.18
DDC1YPL194W GIN4Q12263 1142 aa7.68□□□□□ -1.18
DDC1YPL194W YFR016CP43597 1233 aaKnown RBP7.67□□□□□ -1.18
DDC1YPL194W DOS2P54858 310 aa7.67□□□□□ -1.18
DDC1YPL194W VPS72Q03388 795 aa7.67□□□□□ -1.18
DDC1YPL194W YPR148CQ06523 435 aa7.67□□□□□ -1.18
DDC1YPL194W RTS3P53289 263 aa7.66□□□□□ -1.18
DDC1YPL194W YNR021WP53723 404 aaKnown RBP7.66□□□□□ -1.18
DDC1YPL194W VPS70P47161 811 aa7.66□□□□□ -1.18
DDC1YPL194W DSF2P38213 736 aa7.64□□□□□ -1.19
DDC1YPL194W MNN4P36044 1178 aa7.62□□□□□ -1.19
DDC1YPL194W GUA1P38625 525 aaKnown RBP7.62□□□□□ -1.19
DDC1YPL194W TPO2P53283 614 aa7.62□□□□□ -1.19
DDC1YPL194W SLD2P34252 453 aa7.61□□□□□ -1.19
DDC1YPL194W YJR008WP47085 338 aa7.61□□□□□ -1.19
DDC1YPL194W ISW2Q08773 1120 aa7.6□□□□□ -1.19
DDC1YPL194W OSW7P43611 510 aa7.59□□□□□ -1.19
DDC1YPL194W AIM7Q12156 149 aa7.59□□□□□ -1.19
DDC1YPL194W RRN6P32786 894 aa7.59□□□□□ -1.19
DDC1YPL194W SET1P38827 1080 aaKnown RBP7.59□□□□□ -1.19
DDC1YPL194W GLC3P32775 704 aa7.58□□□□□ -1.2
DDC1YPL194W SIS2P36024 562 aa7.58□□□□□ -1.2
DDC1YPL194W SSF1P38789 453 aaPredicted RBP7.58□□□□□ -1.2
DDC1YPL194W OCA5P38738 679 aa7.57□□□□□ -1.2
DDC1YPL194W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
DDC1YPL194W CST9Q06032 482 aa7.55□□□□□ -1.2
DDC1YPL194W REB1P21538 810 aa7.53□□□□□ -1.2
DDC1YPL194W BUD21Q08492 214 aaPredicted RBP7.53□□□□□ -1.2
DDC1YPL194W HPC2Q01448 625 aa7.52□□□□□ -1.2
DDC1YPL194W PBS2P08018 668 aa7.52□□□□□ -1.21
DDC1YPL194W HEM3P28789 327 aa7.52□□□□□ -1.21
DDC1YPL194W RPG1P38249 964 aaKnown RBP7.5□□□□□ -1.21
DDC1YPL194W YIL055CP40523 627 aaKnown RBP7.5□□□□□ -1.21
DDC1YPL194W SEN54Q02825 467 aaPredicted RBP7.5□□□□□ -1.21
DDC1YPL194W RPS0BP46654 252 aaKnown RBP7.5□□□□□ -1.21
DDC1YPL194W YAF9P53930 226 aa7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms