Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PSMD4P55036 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.66■■□□□ 1.06
PSMD4P55036 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PSMD4P55036 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PSMD4P55036 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.65■■□□□ 1.06
PSMD4P55036 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PSMD4P55036 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PSMD4P55036 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PSMD4P55036 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PSMD4P55036 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PSMD4P55036 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.65■■□□□ 1.06
PSMD4P55036 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PSMD4P55036 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.65■■□□□ 1.06
PSMD4P55036 AC010980.1-201ENST00000587192 1142 ntBASIC21.65■■□□□ 1.06
PSMD4P55036 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PSMD4P55036 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PSMD4P55036 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PSMD4P55036 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.65■■□□□ 1.06
PSMD4P55036 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.64■■□□□ 1.06
PSMD4P55036 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PSMD4P55036 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PSMD4P55036 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PSMD4P55036 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PSMD4P55036 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.63■■□□□ 1.05
PSMD4P55036 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PSMD4P55036 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.63■■□□□ 1.05
PSMD4P55036 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PSMD4P55036 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PSMD4P55036 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PSMD4P55036 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PSMD4P55036 AL139125.2-201ENST00000623134 1869 ntBASIC21.62■■□□□ 1.05
PSMD4P55036 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PSMD4P55036 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PSMD4P55036 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PSMD4P55036 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PSMD4P55036 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.62■■□□□ 1.05
PSMD4P55036 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PSMD4P55036 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.62■■□□□ 1.05
PSMD4P55036 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.62■■□□□ 1.05
PSMD4P55036 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.62■■□□□ 1.05
PSMD4P55036 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
PSMD4P55036 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PSMD4P55036 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PSMD4P55036 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PSMD4P55036 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PSMD4P55036 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PSMD4P55036 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PSMD4P55036 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PSMD4P55036 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.61■■□□□ 1.05
PSMD4P55036 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.61■■□□□ 1.05
PSMD4P55036 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.61■■□□□ 1.05
PSMD4P55036 AC011551.1-201ENST00000614101 683 ntBASIC21.61■■□□□ 1.05
PSMD4P55036 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.61■■□□□ 1.05
PSMD4P55036 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.61■■□□□ 1.05
PSMD4P55036 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.61■■□□□ 1.05
PSMD4P55036 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.6■■□□□ 1.05
PSMD4P55036 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.6■■□□□ 1.05
PSMD4P55036 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PSMD4P55036 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PSMD4P55036 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PSMD4P55036 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PSMD4P55036 AC090877.2-201ENST00000558441 1738 ntBASIC21.6■■□□□ 1.05
PSMD4P55036 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PSMD4P55036 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
PSMD4P55036 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PSMD4P55036 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.59■■□□□ 1.05
PSMD4P55036 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.59■■□□□ 1.05
PSMD4P55036 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PSMD4P55036 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PSMD4P55036 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PSMD4P55036 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.58■■□□□ 1.05
PSMD4P55036 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PSMD4P55036 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PSMD4P55036 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PSMD4P55036 YBX1P4-201ENST00000392794 808 ntBASIC21.58■■□□□ 1.05
PSMD4P55036 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PSMD4P55036 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PSMD4P55036 MIR4508-201ENST00000584178 70 ntBASIC21.58■■□□□ 1.05
PSMD4P55036 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PSMD4P55036 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.58■■□□□ 1.04
PSMD4P55036 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PSMD4P55036 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.57■■□□□ 1.04
PSMD4P55036 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
PSMD4P55036 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
PSMD4P55036 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.57■■□□□ 1.04
PSMD4P55036 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PSMD4P55036 PVT1_1.1-201ENST00000615125 194 ntBASIC21.57■■□□□ 1.04
PSMD4P55036 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PSMD4P55036 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.57■■□□□ 1.04
PSMD4P55036 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PSMD4P55036 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMD4P55036 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMD4P55036 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.56■■□□□ 1.04
PSMD4P55036 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PSMD4P55036 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMD4P55036 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMD4P55036 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PSMD4P55036 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PSMD4P55036 AC141586.4-201ENST00000624558 1573 ntBASIC21.55■■□□□ 1.04
PSMD4P55036 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms