Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.34■■□□□ 1.33
BCKDHBP21953 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BCKDHBP21953 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.33■■□□□ 1.33
BCKDHBP21953 AC024257.2-201ENST00000549699 147 ntBASIC23.33■■□□□ 1.33
BCKDHBP21953 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
BCKDHBP21953 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.33■■□□□ 1.33
BCKDHBP21953 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
BCKDHBP21953 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
BCKDHBP21953 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.32■■□□□ 1.32
BCKDHBP21953 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
BCKDHBP21953 AC142086.6-201ENST00000621154 1765 ntBASIC23.32■■□□□ 1.32
BCKDHBP21953 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.32■■□□□ 1.32
BCKDHBP21953 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BCKDHBP21953 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
BCKDHBP21953 SRD5A1P1-201ENST00000442297 786 ntBASIC23.32■■□□□ 1.32
BCKDHBP21953 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.32■■□□□ 1.32
BCKDHBP21953 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BCKDHBP21953 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.32■■□□□ 1.32
BCKDHBP21953 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.32■■□□□ 1.32
BCKDHBP21953 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BCKDHBP21953 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BCKDHBP21953 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BCKDHBP21953 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.31■■□□□ 1.32
BCKDHBP21953 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.31■■□□□ 1.32
BCKDHBP21953 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BCKDHBP21953 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.3■■□□□ 1.32
BCKDHBP21953 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.3■■□□□ 1.32
BCKDHBP21953 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BCKDHBP21953 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
BCKDHBP21953 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.3■■□□□ 1.32
BCKDHBP21953 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
BCKDHBP21953 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHBP21953 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
BCKDHBP21953 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHBP21953 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHBP21953 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHBP21953 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHBP21953 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.29■■□□□ 1.32
BCKDHBP21953 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.29■■□□□ 1.32
BCKDHBP21953 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHBP21953 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.29■■□□□ 1.32
BCKDHBP21953 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
BCKDHBP21953 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BCKDHBP21953 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
BCKDHBP21953 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.28■■□□□ 1.32
BCKDHBP21953 EDA-201ENST00000338901 1233 ntBASIC23.28■■□□□ 1.32
BCKDHBP21953 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BCKDHBP21953 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
BCKDHBP21953 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
BCKDHBP21953 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
BCKDHBP21953 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
BCKDHBP21953 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BCKDHBP21953 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BCKDHBP21953 AL355001.2-201ENST00000620617 1191 ntBASIC23.27■■□□□ 1.32
BCKDHBP21953 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BCKDHBP21953 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.27■■□□□ 1.32
BCKDHBP21953 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.27■■□□□ 1.31
BCKDHBP21953 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.26■■□□□ 1.31
BCKDHBP21953 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
BCKDHBP21953 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.25■■□□□ 1.31
BCKDHBP21953 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BCKDHBP21953 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
BCKDHBP21953 AC105265.2-201ENST00000467189 838 ntBASIC23.25■■□□□ 1.31
BCKDHBP21953 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BCKDHBP21953 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
BCKDHBP21953 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.24■■□□□ 1.31
BCKDHBP21953 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.24■■□□□ 1.31
BCKDHBP21953 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
BCKDHBP21953 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
BCKDHBP21953 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
BCKDHBP21953 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
BCKDHBP21953 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BCKDHBP21953 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BCKDHBP21953 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BCKDHBP21953 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
BCKDHBP21953 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BCKDHBP21953 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.23■■□□□ 1.31
BCKDHBP21953 AF213884.3-201ENST00000563833 479 ntBASIC23.23■■□□□ 1.31
BCKDHBP21953 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.23■■□□□ 1.31
BCKDHBP21953 MIR5787-201ENST00000611784 55 ntBASIC23.23■■□□□ 1.31
BCKDHBP21953 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.23■■□□□ 1.31
BCKDHBP21953 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BCKDHBP21953 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.23■■□□□ 1.31
BCKDHBP21953 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
BCKDHBP21953 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.22■■□□□ 1.31
BCKDHBP21953 AC096887.2-201ENST00000623443 1957 ntBASIC23.22■■□□□ 1.31
BCKDHBP21953 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
BCKDHBP21953 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
BCKDHBP21953 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.22■■□□□ 1.31
BCKDHBP21953 AL136967.2-201ENST00000623968 743 ntBASIC23.22■■□□□ 1.31
BCKDHBP21953 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.22■■□□□ 1.31
BCKDHBP21953 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
BCKDHBP21953 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.21■■□□□ 1.31
BCKDHBP21953 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
BCKDHBP21953 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
BCKDHBP21953 AC104564.3-201ENST00000582367 638 ntBASIC23.21■■□□□ 1.31
BCKDHBP21953 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
BCKDHBP21953 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
BCKDHBP21953 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
BCKDHBP21953 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms