Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
HLA-AP01891 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-AP01891 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-AP01891 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.58■□□□□ 0.72
HLA-AP01891 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.58■□□□□ 0.72
HLA-AP01891 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-AP01891 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-AP01891 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-AP01891 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HLA-AP01891 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-AP01891 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-AP01891 MIR7108-201ENST00000614319 87 ntBASIC19.57■□□□□ 0.72
HLA-AP01891 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-AP01891 AL359504.2-201ENST00000605506 1601 ntBASIC19.57■□□□□ 0.72
HLA-AP01891 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-AP01891 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HLA-AP01891 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-AP01891 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-AP01891 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.56■□□□□ 0.72
HLA-AP01891 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
HLA-AP01891 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-AP01891 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.56■□□□□ 0.72
HLA-AP01891 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-AP01891 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.56■□□□□ 0.72
HLA-AP01891 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-AP01891 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-AP01891 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-AP01891 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-AP01891 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HLA-AP01891 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-AP01891 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-AP01891 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-AP01891 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.56■□□□□ 0.72
HLA-AP01891 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HLA-AP01891 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-AP01891 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-AP01891 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-AP01891 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-AP01891 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.55■□□□□ 0.72
HLA-AP01891 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.55■□□□□ 0.72
HLA-AP01891 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HLA-AP01891 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.55■□□□□ 0.72
HLA-AP01891 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-AP01891 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-AP01891 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HLA-AP01891 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
HLA-AP01891 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-AP01891 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-AP01891 DUX4L13-201ENST00000554103 1267 ntBASIC19.54■□□□□ 0.72
HLA-AP01891 DUX4L15-201ENST00000611059 1267 ntBASIC19.54■□□□□ 0.72
HLA-AP01891 DUX4L23-201ENST00000615195 1269 ntBASIC19.54■□□□□ 0.72
HLA-AP01891 DUX4L24-201ENST00000617576 1269 ntBASIC19.54■□□□□ 0.72
HLA-AP01891 DUX4L22-201ENST00000618238 1269 ntBASIC19.54■□□□□ 0.72
HLA-AP01891 DUX4L20-201ENST00000619712 1269 ntBASIC19.54■□□□□ 0.72
HLA-AP01891 DUX4L21-201ENST00000622058 1269 ntBASIC19.54■□□□□ 0.72
HLA-AP01891 DUX4L10-201ENST00000622460 1267 ntBASIC19.54■□□□□ 0.72
HLA-AP01891 DUX4L25-201ENST00000624915 1269 ntBASIC19.54■□□□□ 0.72
HLA-AP01891 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
HLA-AP01891 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HLA-AP01891 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
HLA-AP01891 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.54■□□□□ 0.72
HLA-AP01891 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-AP01891 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.54■□□□□ 0.72
HLA-AP01891 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.53■□□□□ 0.72
HLA-AP01891 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-AP01891 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-AP01891 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.53■□□□□ 0.72
HLA-AP01891 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HLA-AP01891 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.53■□□□□ 0.72
HLA-AP01891 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HLA-AP01891 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.53■□□□□ 0.72
HLA-AP01891 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.53■□□□□ 0.72
HLA-AP01891 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.53■□□□□ 0.72
HLA-AP01891 PKD1P6-201ENST00000343738 4769 ntBASIC19.52■□□□□ 0.72
HLA-AP01891 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-AP01891 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-AP01891 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.52■□□□□ 0.72
HLA-AP01891 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-AP01891 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HLA-AP01891 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HLA-AP01891 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-AP01891 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-AP01891 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
HLA-AP01891 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HLA-AP01891 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.51■□□□□ 0.71
HLA-AP01891 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
HLA-AP01891 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.51■□□□□ 0.71
HLA-AP01891 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-AP01891 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HLA-AP01891 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-AP01891 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.5■□□□□ 0.71
HLA-AP01891 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-AP01891 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-AP01891 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-AP01891 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.5■□□□□ 0.71
HLA-AP01891 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.5■□□□□ 0.71
HLA-AP01891 AC233723.2-201ENST00000623798 2106 ntBASIC19.5■□□□□ 0.71
HLA-AP01891 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HLA-AP01891 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
HLA-AP01891 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms