Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 SNAI3-AS1-204ENST00000567997 2048 ntBASIC32.54■■■□□ 2.8
BRD4O60885 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.53■■■□□ 2.8
BRD4O60885 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC32.53■■■□□ 2.8
BRD4O60885 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.53■■■□□ 2.8
BRD4O60885 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
BRD4O60885 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC32.52■■■□□ 2.8
BRD4O60885 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC32.52■■■□□ 2.8
BRD4O60885 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC32.52■■■□□ 2.8
BRD4O60885 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC32.52■■■□□ 2.8
BRD4O60885 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC32.51■■■□□ 2.8
BRD4O60885 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
BRD4O60885 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.8
BRD4O60885 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
BRD4O60885 AC010997.5-201ENST00000609182 354 ntBASIC32.51■■■□□ 2.79
BRD4O60885 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.79
BRD4O60885 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
BRD4O60885 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
BRD4O60885 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC32.5■■■□□ 2.79
BRD4O60885 AL139246.5-201ENST00000606645 996 ntBASIC32.5■■■□□ 2.79
BRD4O60885 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
BRD4O60885 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC32.5■■■□□ 2.79
BRD4O60885 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC32.5■■■□□ 2.79
BRD4O60885 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
BRD4O60885 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC32.5■■■□□ 2.79
BRD4O60885 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BRD4O60885 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC32.49■■■□□ 2.79
BRD4O60885 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
BRD4O60885 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
BRD4O60885 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
BRD4O60885 SRR-208ENST00000576848 588 ntTSL 4 BASIC32.49■■■□□ 2.79
BRD4O60885 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BRD4O60885 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BRD4O60885 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
BRD4O60885 TRIR-202ENST00000588213 841 ntTSL 3 BASIC32.48■■■□□ 2.79
BRD4O60885 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
BRD4O60885 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
BRD4O60885 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC32.48■■■□□ 2.79
BRD4O60885 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC32.48■■■□□ 2.79
BRD4O60885 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC32.47■■■□□ 2.79
BRD4O60885 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC32.47■■■□□ 2.79
BRD4O60885 MTDHP2-201ENST00000601468 714 ntBASIC32.47■■■□□ 2.79
BRD4O60885 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
BRD4O60885 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC32.47■■■□□ 2.79
BRD4O60885 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
BRD4O60885 TK2-202ENST00000417693 1046 ntTSL 2 BASIC32.46■■■□□ 2.79
BRD4O60885 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC32.46■■■□□ 2.79
BRD4O60885 EXOG-217ENST00000630638 197 ntTSL 5 BASIC32.46■■■□□ 2.79
BRD4O60885 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
BRD4O60885 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC32.45■■■□□ 2.79
BRD4O60885 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
BRD4O60885 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
BRD4O60885 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
BRD4O60885 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.45■■■□□ 2.79
BRD4O60885 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC32.45■■■□□ 2.78
BRD4O60885 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC32.45■■■□□ 2.78
BRD4O60885 LSM4-201ENST00000252816 986 ntTSL 2 BASIC32.45■■■□□ 2.78
BRD4O60885 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC32.45■■■□□ 2.78
BRD4O60885 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC32.44■■■□□ 2.78
BRD4O60885 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC32.44■■■□□ 2.78
BRD4O60885 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
BRD4O60885 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC32.44■■■□□ 2.78
BRD4O60885 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC32.44■■■□□ 2.78
BRD4O60885 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
BRD4O60885 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC32.43■■■□□ 2.78
BRD4O60885 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
BRD4O60885 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
BRD4O60885 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
BRD4O60885 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC32.42■■■□□ 2.78
BRD4O60885 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
BRD4O60885 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
BRD4O60885 AF131216.4-201ENST00000638924 1588 ntBASIC32.41■■■□□ 2.78
BRD4O60885 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
BRD4O60885 AL136116.3-201ENST00000402907 1138 ntBASIC32.4■■■□□ 2.78
BRD4O60885 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC32.4■■■□□ 2.78
BRD4O60885 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC32.4■■■□□ 2.78
BRD4O60885 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
BRD4O60885 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
BRD4O60885 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
BRD4O60885 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
BRD4O60885 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
BRD4O60885 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
BRD4O60885 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.77
BRD4O60885 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
BRD4O60885 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
BRD4O60885 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
BRD4O60885 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC32.38■■■□□ 2.77
BRD4O60885 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
BRD4O60885 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC32.37■■■□□ 2.77
BRD4O60885 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
BRD4O60885 NALT1-201ENST00000429224 738 ntTSL 5 BASIC32.37■■■□□ 2.77
BRD4O60885 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC32.37■■■□□ 2.77
BRD4O60885 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC32.37■■■□□ 2.77
BRD4O60885 AL356740.2-201ENST00000601559 647 ntBASIC32.37■■■□□ 2.77
BRD4O60885 AL512631.2-201ENST00000604634 923 ntBASIC32.37■■■□□ 2.77
BRD4O60885 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
BRD4O60885 CEBPA-AS1-201ENST00000592982 2198 ntBASIC32.36■■■□□ 2.77
BRD4O60885 MIR935-201ENST00000401179 91 ntBASIC32.36■■■□□ 2.77
BRD4O60885 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC32.36■■■□□ 2.77
BRD4O60885 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
BRD4O60885 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms