Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CYTIPO60759 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CYTIPO60759 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CYTIPO60759 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CYTIPO60759 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CYTIPO60759 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CYTIPO60759 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CYTIPO60759 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CYTIPO60759 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.83■□□□□ 0.93
CYTIPO60759 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CYTIPO60759 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.83■□□□□ 0.93
CYTIPO60759 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.83■□□□□ 0.93
CYTIPO60759 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CYTIPO60759 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CYTIPO60759 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CYTIPO60759 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CYTIPO60759 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CYTIPO60759 AC009299.2-201ENST00000482477 511 ntBASIC20.83■□□□□ 0.93
CYTIPO60759 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CYTIPO60759 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.83■□□□□ 0.92
CYTIPO60759 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CYTIPO60759 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CYTIPO60759 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.82■□□□□ 0.92
CYTIPO60759 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CYTIPO60759 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.82■□□□□ 0.92
CYTIPO60759 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CYTIPO60759 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CYTIPO60759 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.81■□□□□ 0.92
CYTIPO60759 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.81■□□□□ 0.92
CYTIPO60759 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CYTIPO60759 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CYTIPO60759 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
CYTIPO60759 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.81■□□□□ 0.92
CYTIPO60759 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CYTIPO60759 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CYTIPO60759 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CYTIPO60759 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.8■□□□□ 0.92
CYTIPO60759 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CYTIPO60759 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CYTIPO60759 AL035685.1-201ENST00000636663 812 ntBASIC20.8■□□□□ 0.92
CYTIPO60759 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CYTIPO60759 AC142381.3-201ENST00000568208 1670 ntBASIC20.8■□□□□ 0.92
CYTIPO60759 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CYTIPO60759 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CYTIPO60759 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CYTIPO60759 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.79■□□□□ 0.92
CYTIPO60759 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.79■□□□□ 0.92
CYTIPO60759 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CYTIPO60759 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CYTIPO60759 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.79■□□□□ 0.92
CYTIPO60759 AC137630.3-201ENST00000607245 391 ntBASIC20.79■□□□□ 0.92
CYTIPO60759 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CYTIPO60759 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYTIPO60759 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYTIPO60759 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYTIPO60759 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CYTIPO60759 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.78■□□□□ 0.92
CYTIPO60759 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYTIPO60759 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.78■□□□□ 0.92
CYTIPO60759 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.78■□□□□ 0.92
CYTIPO60759 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CYTIPO60759 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CYTIPO60759 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CYTIPO60759 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CYTIPO60759 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CYTIPO60759 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.77■□□□□ 0.92
CYTIPO60759 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.77■□□□□ 0.92
CYTIPO60759 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CYTIPO60759 Z92544.1-202ENST00000571933 1220 ntBASIC20.77■□□□□ 0.92
CYTIPO60759 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CYTIPO60759 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.77■□□□□ 0.92
CYTIPO60759 AP003733.4-201ENST00000623785 1697 ntBASIC20.77■□□□□ 0.91
CYTIPO60759 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CYTIPO60759 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYTIPO60759 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYTIPO60759 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CYTIPO60759 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.76■□□□□ 0.91
CYTIPO60759 BX664725.1-201ENST00000438252 379 ntBASIC20.76■□□□□ 0.91
CYTIPO60759 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.76■□□□□ 0.91
CYTIPO60759 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CYTIPO60759 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYTIPO60759 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYTIPO60759 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.75■□□□□ 0.91
CYTIPO60759 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYTIPO60759 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.75■□□□□ 0.91
CYTIPO60759 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYTIPO60759 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CYTIPO60759 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.75■□□□□ 0.91
CYTIPO60759 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYTIPO60759 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CYTIPO60759 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYTIPO60759 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYTIPO60759 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYTIPO60759 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYTIPO60759 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CYTIPO60759 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CYTIPO60759 AF131216.4-201ENST00000638924 1588 ntBASIC20.74■□□□□ 0.91
CYTIPO60759 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYTIPO60759 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CYTIPO60759 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms