Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SYNCRIPO60506 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.83■■□□□ 1.41
SYNCRIPO60506 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.83■■□□□ 1.41
SYNCRIPO60506 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.83■■□□□ 1.41
SYNCRIPO60506 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SYNCRIPO60506 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SYNCRIPO60506 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNCRIPO60506 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNCRIPO60506 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SYNCRIPO60506 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.82■■□□□ 1.4
SYNCRIPO60506 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYNCRIPO60506 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYNCRIPO60506 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.81■■□□□ 1.4
SYNCRIPO60506 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.81■■□□□ 1.4
SYNCRIPO60506 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SYNCRIPO60506 AC097639.1-201ENST00000565519 1891 ntBASIC23.81■■□□□ 1.4
SYNCRIPO60506 AC019069.1-201ENST00000610008 1333 ntBASIC23.81■■□□□ 1.4
SYNCRIPO60506 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.81■■□□□ 1.4
SYNCRIPO60506 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SYNCRIPO60506 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNCRIPO60506 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNCRIPO60506 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.8■■□□□ 1.4
SYNCRIPO60506 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNCRIPO60506 ERN1-208ENST00000606895 2068 ntBASIC23.8■■□□□ 1.4
SYNCRIPO60506 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.8■■□□□ 1.4
SYNCRIPO60506 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNCRIPO60506 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SYNCRIPO60506 AC092803.2-201ENST00000564287 1899 ntBASIC23.79■■□□□ 1.4
SYNCRIPO60506 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.79■■□□□ 1.4
SYNCRIPO60506 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
SYNCRIPO60506 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.79■■□□□ 1.4
SYNCRIPO60506 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SYNCRIPO60506 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNCRIPO60506 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNCRIPO60506 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNCRIPO60506 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNCRIPO60506 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.78■■□□□ 1.4
SYNCRIPO60506 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SYNCRIPO60506 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SYNCRIPO60506 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.77■■□□□ 1.4
SYNCRIPO60506 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SYNCRIPO60506 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.77■■□□□ 1.4
SYNCRIPO60506 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.77■■□□□ 1.4
SYNCRIPO60506 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.77■■□□□ 1.4
SYNCRIPO60506 MIR6724-1-201ENST00000616420 92 ntBASIC23.77■■□□□ 1.4
SYNCRIPO60506 MIR6724-2-201ENST00000616483 92 ntBASIC23.77■■□□□ 1.4
SYNCRIPO60506 MIR6724-4-201ENST00000617390 92 ntBASIC23.77■■□□□ 1.4
SYNCRIPO60506 MIR6724-3-201ENST00000622482 92 ntBASIC23.77■■□□□ 1.4
SYNCRIPO60506 AC096887.2-201ENST00000623443 1957 ntBASIC23.77■■□□□ 1.4
SYNCRIPO60506 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.77■■□□□ 1.4
SYNCRIPO60506 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYNCRIPO60506 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.76■■□□□ 1.39
SYNCRIPO60506 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SYNCRIPO60506 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYNCRIPO60506 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYNCRIPO60506 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYNCRIPO60506 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
SYNCRIPO60506 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYNCRIPO60506 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SYNCRIPO60506 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYNCRIPO60506 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SYNCRIPO60506 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.75■■□□□ 1.39
SYNCRIPO60506 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYNCRIPO60506 AC090877.2-201ENST00000558441 1738 ntBASIC23.75■■□□□ 1.39
SYNCRIPO60506 DUSP8P4-201ENST00000399538 1761 ntBASIC23.75■■□□□ 1.39
SYNCRIPO60506 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.75■■□□□ 1.39
SYNCRIPO60506 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
SYNCRIPO60506 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYNCRIPO60506 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.74■■□□□ 1.39
SYNCRIPO60506 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYNCRIPO60506 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.74■■□□□ 1.39
SYNCRIPO60506 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.74■■□□□ 1.39
SYNCRIPO60506 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.74■■□□□ 1.39
SYNCRIPO60506 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.74■■□□□ 1.39
SYNCRIPO60506 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.74■■□□□ 1.39
SYNCRIPO60506 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.74■■□□□ 1.39
SYNCRIPO60506 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.74■■□□□ 1.39
SYNCRIPO60506 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.74■■□□□ 1.39
SYNCRIPO60506 AF131216.4-201ENST00000638924 1588 ntBASIC23.74■■□□□ 1.39
SYNCRIPO60506 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYNCRIPO60506 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SYNCRIPO60506 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYNCRIPO60506 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.73■■□□□ 1.39
SYNCRIPO60506 AC010501.1-201ENST00000606270 1962 ntBASIC23.73■■□□□ 1.39
SYNCRIPO60506 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYNCRIPO60506 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYNCRIPO60506 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYNCRIPO60506 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.73■■□□□ 1.39
SYNCRIPO60506 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.73■■□□□ 1.39
SYNCRIPO60506 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYNCRIPO60506 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.73■■□□□ 1.39
SYNCRIPO60506 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYNCRIPO60506 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYNCRIPO60506 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYNCRIPO60506 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SYNCRIPO60506 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SYNCRIPO60506 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.72■■□□□ 1.39
SYNCRIPO60506 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SYNCRIPO60506 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.72■■□□□ 1.39
SYNCRIPO60506 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms