Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
TRAFD1O14545 MIR4508-201ENST00000584178 70 ntBASIC23.9■■□□□ 1.42
TRAFD1O14545 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRAFD1O14545 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRAFD1O14545 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRAFD1O14545 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRAFD1O14545 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRAFD1O14545 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRAFD1O14545 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRAFD1O14545 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
TRAFD1O14545 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.89■■□□□ 1.41
TRAFD1O14545 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRAFD1O14545 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRAFD1O14545 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRAFD1O14545 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAFD1O14545 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.88■■□□□ 1.41
TRAFD1O14545 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAFD1O14545 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRAFD1O14545 RARRES2P1-201ENST00000474487 481 ntBASIC23.88■■□□□ 1.41
TRAFD1O14545 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.88■■□□□ 1.41
TRAFD1O14545 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAFD1O14545 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRAFD1O14545 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAFD1O14545 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.87■■□□□ 1.41
TRAFD1O14545 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.87■■□□□ 1.41
TRAFD1O14545 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAFD1O14545 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAFD1O14545 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRAFD1O14545 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.86■■□□□ 1.41
TRAFD1O14545 KRT8P33-201ENST00000508125 1423 ntBASIC23.86■■□□□ 1.41
TRAFD1O14545 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.86■■□□□ 1.41
TRAFD1O14545 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRAFD1O14545 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.86■■□□□ 1.41
TRAFD1O14545 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
TRAFD1O14545 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
TRAFD1O14545 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
TRAFD1O14545 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.86■■□□□ 1.41
TRAFD1O14545 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRAFD1O14545 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAFD1O14545 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAFD1O14545 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAFD1O14545 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TRAFD1O14545 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.85■■□□□ 1.41
TRAFD1O14545 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRAFD1O14545 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TRAFD1O14545 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.85■■□□□ 1.41
TRAFD1O14545 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
TRAFD1O14545 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TRAFD1O14545 FOXO3B-201ENST00000395675 1928 ntBASIC23.84■■□□□ 1.41
TRAFD1O14545 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.84■■□□□ 1.41
TRAFD1O14545 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
TRAFD1O14545 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAFD1O14545 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAFD1O14545 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.84■■□□□ 1.41
TRAFD1O14545 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAFD1O14545 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAFD1O14545 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRAFD1O14545 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRAFD1O14545 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRAFD1O14545 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.83■■□□□ 1.41
TRAFD1O14545 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TRAFD1O14545 AL592295.1-201ENST00000400984 884 ntBASIC23.83■■□□□ 1.41
TRAFD1O14545 AC022616.5-201ENST00000518796 181 ntBASIC23.83■■□□□ 1.41
TRAFD1O14545 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.83■■□□□ 1.41
TRAFD1O14545 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.83■■□□□ 1.4
TRAFD1O14545 YBX1P4-201ENST00000392794 808 ntBASIC23.82■■□□□ 1.4
TRAFD1O14545 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRAFD1O14545 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAFD1O14545 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAFD1O14545 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.81■■□□□ 1.4
TRAFD1O14545 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.81■■□□□ 1.4
TRAFD1O14545 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.81■■□□□ 1.4
TRAFD1O14545 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAFD1O14545 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRAFD1O14545 AC138932.3-201ENST00000567634 1902 ntBASIC23.8■■□□□ 1.4
TRAFD1O14545 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TRAFD1O14545 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRAFD1O14545 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRAFD1O14545 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.8■■□□□ 1.4
TRAFD1O14545 SLC6A10P-202ENST00000431994 2058 ntBASIC23.8■■□□□ 1.4
TRAFD1O14545 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRAFD1O14545 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRAFD1O14545 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRAFD1O14545 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAFD1O14545 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.79■■□□□ 1.4
TRAFD1O14545 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAFD1O14545 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAFD1O14545 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAFD1O14545 AC103724.3-201ENST00000564481 992 ntBASIC23.79■■□□□ 1.4
TRAFD1O14545 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.79■■□□□ 1.4
TRAFD1O14545 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAFD1O14545 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAFD1O14545 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRAFD1O14545 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
TRAFD1O14545 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRAFD1O14545 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRAFD1O14545 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
TRAFD1O14545 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRAFD1O14545 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAFD1O14545 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms