Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAV13-1A0A0B4J241 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAV13-1A0A0B4J241 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 AC141586.4-201ENST00000624558 1573 ntBASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV13-1A0A0B4J241 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.14■□□□□ 0.18
TRAV13-1A0A0B4J241 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV13-1A0A0B4J241 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV13-1A0A0B4J241 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV13-1A0A0B4J241 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV13-1A0A0B4J241 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV13-1A0A0B4J241 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV13-1A0A0B4J241 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV13-1A0A0B4J241 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV13-1A0A0B4J241 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV13-1A0A0B4J241 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV13-1A0A0B4J241 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 MIR3648-2-201ENST00000581792 180 ntBASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 MIR3648-1-201ENST00000615959 180 ntBASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV13-1A0A0B4J241 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms