Protein–RNA interactions for Protein: A0A0A6YYG2

TRBV6-6, T-cell receptor beta variable 6-6 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-6A0A0A6YYG2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV6-6A0A0A6YYG2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV6-6A0A0A6YYG2 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV6-6A0A0A6YYG2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV6-6A0A0A6YYG2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TRBV6-6A0A0A6YYG2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV6-6A0A0A6YYG2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV6-6A0A0A6YYG2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRBV6-6A0A0A6YYG2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV6-6A0A0A6YYG2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
TRBV6-6A0A0A6YYG2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV6-6A0A0A6YYG2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV6-6A0A0A6YYG2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV6-6A0A0A6YYG2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.39■□□□□ 0.69
TRBV6-6A0A0A6YYG2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV6-6A0A0A6YYG2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV6-6A0A0A6YYG2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV6-6A0A0A6YYG2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.39■□□□□ 0.69
TRBV6-6A0A0A6YYG2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV6-6A0A0A6YYG2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV6-6A0A0A6YYG2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV6-6A0A0A6YYG2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV6-6A0A0A6YYG2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV6-6A0A0A6YYG2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRBV6-6A0A0A6YYG2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV6-6A0A0A6YYG2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV6-6A0A0A6YYG2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.38■□□□□ 0.69
TRBV6-6A0A0A6YYG2 RNF126P1-201ENST00000567452 1320 ntBASIC19.38■□□□□ 0.69
TRBV6-6A0A0A6YYG2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.38■□□□□ 0.69
TRBV6-6A0A0A6YYG2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.38■□□□□ 0.69
TRBV6-6A0A0A6YYG2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 RPS2P7-201ENST00000447334 885 ntBASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-6A0A0A6YYG2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 ABCB10P4-201ENST00000566803 2184 ntBASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 AC012676.1-201ENST00000574705 1949 ntBASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 DUSP8P5-201ENST00000422884 1815 ntBASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-6A0A0A6YYG2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-6A0A0A6YYG2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.35■□□□□ 0.69
TRBV6-6A0A0A6YYG2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRBV6-6A0A0A6YYG2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-6A0A0A6YYG2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV6-6A0A0A6YYG2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV6-6A0A0A6YYG2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-6A0A0A6YYG2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRBV6-6A0A0A6YYG2 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV6-6A0A0A6YYG2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.34■□□□□ 0.69
TRBV6-6A0A0A6YYG2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV6-6A0A0A6YYG2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV6-6A0A0A6YYG2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRBV6-6A0A0A6YYG2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV6-6A0A0A6YYG2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV6-6A0A0A6YYG2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV6-6A0A0A6YYG2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV6-6A0A0A6YYG2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TRBV6-6A0A0A6YYG2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.33■□□□□ 0.69
TRBV6-6A0A0A6YYG2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV6-6A0A0A6YYG2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV6-6A0A0A6YYG2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV6-6A0A0A6YYG2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV6-6A0A0A6YYG2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV6-6A0A0A6YYG2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.33■□□□□ 0.68
TRBV6-6A0A0A6YYG2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV6-6A0A0A6YYG2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 AC018755.3-202ENST00000596210 929 ntBASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
TRBV6-6A0A0A6YYG2 AC090877.2-201ENST00000558441 1738 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms