Protein–RNA interactions for Protein: A0A075B6U6

TRAV8-7, T-cell receptor alpha variable 8-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-7A0A075B6U6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAV8-7A0A075B6U6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV8-7A0A075B6U6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV8-7A0A075B6U6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV8-7A0A075B6U6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAV8-7A0A075B6U6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAV8-7A0A075B6U6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAV8-7A0A075B6U6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV8-7A0A075B6U6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV8-7A0A075B6U6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRAV8-7A0A075B6U6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRAV8-7A0A075B6U6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRAV8-7A0A075B6U6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-7A0A075B6U6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-7A0A075B6U6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRAV8-7A0A075B6U6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-7A0A075B6U6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-7A0A075B6U6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-7A0A075B6U6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAV8-7A0A075B6U6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRAV8-7A0A075B6U6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV8-7A0A075B6U6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV8-7A0A075B6U6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-7A0A075B6U6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-7A0A075B6U6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-7A0A075B6U6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
TRAV8-7A0A075B6U6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-7A0A075B6U6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV8-7A0A075B6U6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAV8-7A0A075B6U6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV8-7A0A075B6U6 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.21■□□□□ 0.83
TRAV8-7A0A075B6U6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV8-7A0A075B6U6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV8-7A0A075B6U6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRAV8-7A0A075B6U6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TRAV8-7A0A075B6U6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV8-7A0A075B6U6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
TRAV8-7A0A075B6U6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 RP9P-202ENST00000450133 1212 ntBASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV8-7A0A075B6U6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 AC093536.1-201ENST00000569153 554 ntBASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV8-7A0A075B6U6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-7A0A075B6U6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-7A0A075B6U6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-7A0A075B6U6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-7A0A075B6U6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-7A0A075B6U6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-7A0A075B6U6 FOXO3B-201ENST00000395675 1928 ntBASIC20.17■□□□□ 0.82
TRAV8-7A0A075B6U6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV8-7A0A075B6U6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV8-7A0A075B6U6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAV8-7A0A075B6U6 ECEL1P2-201ENST00000461596 1295 ntBASIC20.17■□□□□ 0.82
TRAV8-7A0A075B6U6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRAV8-7A0A075B6U6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV8-7A0A075B6U6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.17■□□□□ 0.82
TRAV8-7A0A075B6U6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.17■□□□□ 0.82
TRAV8-7A0A075B6U6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAV8-7A0A075B6U6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-7A0A075B6U6 AC079834.2-201ENST00000609776 1949 ntBASIC20.16■□□□□ 0.82
TRAV8-7A0A075B6U6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-7A0A075B6U6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAV8-7A0A075B6U6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-7A0A075B6U6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-7A0A075B6U6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
TRAV8-7A0A075B6U6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms