Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.62■■□□□ 1.05
POLR2J3Q9H1A7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR2J3Q9H1A7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.61■■□□□ 1.05
POLR2J3Q9H1A7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR2J3Q9H1A7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.61■■□□□ 1.05
POLR2J3Q9H1A7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR2J3Q9H1A7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POLR2J3Q9H1A7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POLR2J3Q9H1A7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2J3Q9H1A7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2J3Q9H1A7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.6■■□□□ 1.05
POLR2J3Q9H1A7 RAP2CP1-202ENST00000605179 643 ntBASIC21.6■■□□□ 1.05
POLR2J3Q9H1A7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2J3Q9H1A7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2J3Q9H1A7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POLR2J3Q9H1A7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
POLR2J3Q9H1A7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.59■■□□□ 1.05
POLR2J3Q9H1A7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR2J3Q9H1A7 MIR4449-201ENST00000578365 66 ntBASIC21.59■■□□□ 1.05
POLR2J3Q9H1A7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
POLR2J3Q9H1A7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR2J3Q9H1A7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR2J3Q9H1A7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
POLR2J3Q9H1A7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.58■■□□□ 1.05
POLR2J3Q9H1A7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.58■■□□□ 1.05
POLR2J3Q9H1A7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
POLR2J3Q9H1A7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
POLR2J3Q9H1A7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
POLR2J3Q9H1A7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
POLR2J3Q9H1A7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
POLR2J3Q9H1A7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
POLR2J3Q9H1A7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
POLR2J3Q9H1A7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
POLR2J3Q9H1A7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR2J3Q9H1A7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR2J3Q9H1A7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.57■■□□□ 1.04
POLR2J3Q9H1A7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
POLR2J3Q9H1A7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR2J3Q9H1A7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR2J3Q9H1A7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
POLR2J3Q9H1A7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR2J3Q9H1A7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
POLR2J3Q9H1A7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2J3Q9H1A7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2J3Q9H1A7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2J3Q9H1A7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.56■■□□□ 1.04
POLR2J3Q9H1A7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
POLR2J3Q9H1A7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2J3Q9H1A7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2J3Q9H1A7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR2J3Q9H1A7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
POLR2J3Q9H1A7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR2J3Q9H1A7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 AC026202.3-201ENST00000600805 1127 ntBASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.54■■□□□ 1.04
POLR2J3Q9H1A7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR2J3Q9H1A7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
POLR2J3Q9H1A7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR2J3Q9H1A7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR2J3Q9H1A7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
POLR2J3Q9H1A7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR2J3Q9H1A7 GPX1-201ENST00000419349 1106 ntBASIC21.53■■□□□ 1.04
POLR2J3Q9H1A7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR2J3Q9H1A7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.53■■□□□ 1.04
POLR2J3Q9H1A7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2J3Q9H1A7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR2J3Q9H1A7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2J3Q9H1A7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.52■■□□□ 1.04
POLR2J3Q9H1A7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2J3Q9H1A7 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.52■■□□□ 1.04
POLR2J3Q9H1A7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR2J3Q9H1A7 AC133561.1-201ENST00000568600 2415 ntBASIC21.51■■□□□ 1.03
POLR2J3Q9H1A7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.51■■□□□ 1.03
POLR2J3Q9H1A7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
POLR2J3Q9H1A7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2J3Q9H1A7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.51■■□□□ 1.03
POLR2J3Q9H1A7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.51■■□□□ 1.03
POLR2J3Q9H1A7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2J3Q9H1A7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
POLR2J3Q9H1A7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms