Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD4Q9H0A8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 AL157400.5-201ENST00000507624 621 ntBASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD4Q9H0A8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD4Q9H0A8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD4Q9H0A8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 SMPD5-203ENST00000639008 1464 ntBASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
COMMD4Q9H0A8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.58■□□□□ 0.88
COMMD4Q9H0A8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD4Q9H0A8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD4Q9H0A8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.57■□□□□ 0.88
COMMD4Q9H0A8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.57■□□□□ 0.88
COMMD4Q9H0A8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
COMMD4Q9H0A8 AC012676.1-201ENST00000574705 1949 ntBASIC20.57■□□□□ 0.88
COMMD4Q9H0A8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 MIR7108-201ENST00000614319 87 ntBASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.56■□□□□ 0.88
COMMD4Q9H0A8 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 AC060814.1-201ENST00000554326 538 ntBASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD4Q9H0A8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD4Q9H0A8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 AC004812.2-201ENST00000611079 2094 ntBASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD4Q9H0A8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms