Protein–RNA interactions for Protein: Q9BZR6

RTN4R, Reticulon-4 receptor, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RQ9BZR6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4RQ9BZR6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4RQ9BZR6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTN4RQ9BZR6 KRT8P33-201ENST00000508125 1423 ntBASIC21.55■■□□□ 1.04
RTN4RQ9BZR6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RTN4RQ9BZR6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.54■■□□□ 1.04
RTN4RQ9BZR6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTN4RQ9BZR6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.54■■□□□ 1.04
RTN4RQ9BZR6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 AC142381.3-201ENST00000568208 1670 ntBASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RTN4RQ9BZR6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4RQ9BZR6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.52■■□□□ 1.04
RTN4RQ9BZR6 AL592295.1-201ENST00000400984 884 ntBASIC21.52■■□□□ 1.04
RTN4RQ9BZR6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.52■■□□□ 1.04
RTN4RQ9BZR6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.52■■□□□ 1.04
RTN4RQ9BZR6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RTN4RQ9BZR6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RTN4RQ9BZR6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.51■■□□□ 1.03
RTN4RQ9BZR6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.51■■□□□ 1.03
RTN4RQ9BZR6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RTN4RQ9BZR6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 MIR4508-201ENST00000584178 70 ntBASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RTN4RQ9BZR6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
RTN4RQ9BZR6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4RQ9BZR6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4RQ9BZR6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.49■■□□□ 1.03
RTN4RQ9BZR6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RTN4RQ9BZR6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RTN4RQ9BZR6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN4RQ9BZR6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.48■■□□□ 1.03
RTN4RQ9BZR6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RTN4RQ9BZR6 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.47■■□□□ 1.03
RTN4RQ9BZR6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4RQ9BZR6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4RQ9BZR6 RARRES2P1-201ENST00000474487 481 ntBASIC21.47■■□□□ 1.03
RTN4RQ9BZR6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RTN4RQ9BZR6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.47■■□□□ 1.03
RTN4RQ9BZR6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.47■■□□□ 1.03
RTN4RQ9BZR6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.46■■□□□ 1.03
RTN4RQ9BZR6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.46■■□□□ 1.03
RTN4RQ9BZR6 MIR6089-201ENST00000616698 64 ntBASIC21.46■■□□□ 1.03
RTN4RQ9BZR6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTN4RQ9BZR6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.46■■□□□ 1.03
RTN4RQ9BZR6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RTN4RQ9BZR6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.03
RTN4RQ9BZR6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
RTN4RQ9BZR6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RTN4RQ9BZR6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4RQ9BZR6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.45■■□□□ 1.02
RTN4RQ9BZR6 AC022616.5-201ENST00000518796 181 ntBASIC21.45■■□□□ 1.02
RTN4RQ9BZR6 AC103724.3-201ENST00000564481 992 ntBASIC21.45■■□□□ 1.02
RTN4RQ9BZR6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4RQ9BZR6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.45■■□□□ 1.02
RTN4RQ9BZR6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTN4RQ9BZR6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTN4RQ9BZR6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTN4RQ9BZR6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.44■■□□□ 1.02
RTN4RQ9BZR6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RTN4RQ9BZR6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTN4RQ9BZR6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTN4RQ9BZR6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTN4RQ9BZR6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.43■■□□□ 1.02
RTN4RQ9BZR6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.43■■□□□ 1.02
RTN4RQ9BZR6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTN4RQ9BZR6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTN4RQ9BZR6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.43■■□□□ 1.02
RTN4RQ9BZR6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTN4RQ9BZR6 AC090877.2-201ENST00000558441 1738 ntBASIC21.43■■□□□ 1.02
RTN4RQ9BZR6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.43■■□□□ 1.02
RTN4RQ9BZR6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTN4RQ9BZR6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RTN4RQ9BZR6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTN4RQ9BZR6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTN4RQ9BZR6 YBX1P4-201ENST00000392794 808 ntBASIC21.42■■□□□ 1.02
RTN4RQ9BZR6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTN4RQ9BZR6 AC120024.1-201ENST00000562672 995 ntBASIC21.42■■□□□ 1.02
RTN4RQ9BZR6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.42■■□□□ 1.02
RTN4RQ9BZR6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTN4RQ9BZR6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTN4RQ9BZR6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTN4RQ9BZR6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms