Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.95■■■□□ 2.22
RTFDC1Q9BY42 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.95■■■□□ 2.22
RTFDC1Q9BY42 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
RTFDC1Q9BY42 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
RTFDC1Q9BY42 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
RTFDC1Q9BY42 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.94■■■□□ 2.22
RTFDC1Q9BY42 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RTFDC1Q9BY42 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTFDC1Q9BY42 MIR6722-201ENST00000617286 78 ntBASIC28.92■■■□□ 2.22
RTFDC1Q9BY42 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC28.92■■■□□ 2.22
RTFDC1Q9BY42 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTFDC1Q9BY42 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 SNX5-217ENST00000606557 1087 ntBASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 FOXO3B-201ENST00000395675 1928 ntBASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
RTFDC1Q9BY42 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
RTFDC1Q9BY42 ZNRF2P3-201ENST00000424200 374 ntBASIC28.89■■■□□ 2.22
RTFDC1Q9BY42 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.89■■■□□ 2.21
RTFDC1Q9BY42 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RTFDC1Q9BY42 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.88■■■□□ 2.21
RTFDC1Q9BY42 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.88■■■□□ 2.21
RTFDC1Q9BY42 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RTFDC1Q9BY42 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 PBX2P1-201ENST00000493219 1291 ntBASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 AL031432.3-201ENST00000607698 485 ntBASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.84■■■□□ 2.21
RTFDC1Q9BY42 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.84■■■□□ 2.21
RTFDC1Q9BY42 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RTFDC1Q9BY42 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 SUDS3P1-201ENST00000505831 966 ntBASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 RARRES2P6-201ENST00000567333 442 ntBASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 UNC93B3-201ENST00000308076 687 ntBASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 AC142381.2-201ENST00000566120 298 ntBASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RTFDC1Q9BY42 AC090877.2-201ENST00000558441 1738 ntBASIC28.8■■■□□ 2.2
RTFDC1Q9BY42 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 AC026271.2-201ENST00000428091 497 ntBASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
RTFDC1Q9BY42 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms