Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMCN2Q8NDA2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC13.55□□□□□ -0.24
HMCN2Q8NDA2 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HMCN2Q8NDA2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC13.55□□□□□ -0.24
HMCN2Q8NDA2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HMCN2Q8NDA2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.54□□□□□ -0.24
HMCN2Q8NDA2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.53□□□□□ -0.24
HMCN2Q8NDA2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.53□□□□□ -0.24
HMCN2Q8NDA2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HMCN2Q8NDA2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMCN2Q8NDA2 SYT6-210ENST00000641643 1587 ntBASIC13.53□□□□□ -0.24
HMCN2Q8NDA2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HMCN2Q8NDA2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMCN2Q8NDA2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HMCN2Q8NDA2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HMCN2Q8NDA2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 AC093827.2-201ENST00000512654 315 ntBASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HMCN2Q8NDA2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HMCN2Q8NDA2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMCN2Q8NDA2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMCN2Q8NDA2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HMCN2Q8NDA2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMCN2Q8NDA2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC13.52□□□□□ -0.25
HMCN2Q8NDA2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMCN2Q8NDA2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMCN2Q8NDA2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HMCN2Q8NDA2 AC123595.1-201ENST00000440769 1046 ntBASIC13.52□□□□□ -0.25
HMCN2Q8NDA2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 TSPY20P-201ENST00000450910 630 ntBASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HMCN2Q8NDA2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC13.5□□□□□ -0.25
HMCN2Q8NDA2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMCN2Q8NDA2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.5□□□□□ -0.25
HMCN2Q8NDA2 AL499627.2-201ENST00000606283 725 ntBASIC13.5□□□□□ -0.25
HMCN2Q8NDA2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMCN2Q8NDA2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMCN2Q8NDA2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.5□□□□□ -0.25
HMCN2Q8NDA2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMCN2Q8NDA2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HMCN2Q8NDA2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.49□□□□□ -0.25
HMCN2Q8NDA2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.49□□□□□ -0.25
HMCN2Q8NDA2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMCN2Q8NDA2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
HMCN2Q8NDA2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMCN2Q8NDA2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.49□□□□□ -0.25
HMCN2Q8NDA2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC13.49□□□□□ -0.25
HMCN2Q8NDA2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMCN2Q8NDA2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.48□□□□□ -0.25
HMCN2Q8NDA2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC13.48□□□□□ -0.25
HMCN2Q8NDA2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.48□□□□□ -0.25
HMCN2Q8NDA2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.48□□□□□ -0.25
HMCN2Q8NDA2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.48□□□□□ -0.25
HMCN2Q8NDA2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.48□□□□□ -0.25
HMCN2Q8NDA2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMCN2Q8NDA2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMCN2Q8NDA2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMCN2Q8NDA2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HMCN2Q8NDA2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms