Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.61■■□□□ 1.21
KRT78Q8N1N4 AL592295.1-201ENST00000400984 884 ntBASIC22.61■■□□□ 1.21
KRT78Q8N1N4 LONRF2P2-201ENST00000439212 571 ntBASIC22.61■■□□□ 1.21
KRT78Q8N1N4 BHLHE23-202ENST00000612929 1109 ntBASIC22.61■■□□□ 1.21
KRT78Q8N1N4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
KRT78Q8N1N4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
KRT78Q8N1N4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KRT78Q8N1N4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT78Q8N1N4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT78Q8N1N4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KRT78Q8N1N4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KRT78Q8N1N4 MIR6089-201ENST00000616698 64 ntBASIC22.6■■□□□ 1.21
KRT78Q8N1N4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KRT78Q8N1N4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
KRT78Q8N1N4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.6■■□□□ 1.21
KRT78Q8N1N4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT78Q8N1N4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
KRT78Q8N1N4 AC135731.1-201ENST00000569415 2548 ntBASIC22.59■■□□□ 1.21
KRT78Q8N1N4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT78Q8N1N4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.59■■□□□ 1.21
KRT78Q8N1N4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.59■■□□□ 1.21
KRT78Q8N1N4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.59■■□□□ 1.21
KRT78Q8N1N4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.59■■□□□ 1.21
KRT78Q8N1N4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT78Q8N1N4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
KRT78Q8N1N4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KRT78Q8N1N4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
KRT78Q8N1N4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KRT78Q8N1N4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.58■■□□□ 1.21
KRT78Q8N1N4 AC074183.2-201ENST00000623112 922 ntBASIC22.58■■□□□ 1.21
KRT78Q8N1N4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
KRT78Q8N1N4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT78Q8N1N4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT78Q8N1N4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.57■■□□□ 1.2
KRT78Q8N1N4 AC019171.1-201ENST00000601251 1056 ntBASIC22.57■■□□□ 1.2
KRT78Q8N1N4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
KRT78Q8N1N4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
KRT78Q8N1N4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
KRT78Q8N1N4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.56■■□□□ 1.2
KRT78Q8N1N4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
KRT78Q8N1N4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRT78Q8N1N4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KRT78Q8N1N4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.56■■□□□ 1.2
KRT78Q8N1N4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
KRT78Q8N1N4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
KRT78Q8N1N4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KRT78Q8N1N4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.55■■□□□ 1.2
KRT78Q8N1N4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.55■■□□□ 1.2
KRT78Q8N1N4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KRT78Q8N1N4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.55■■□□□ 1.2
KRT78Q8N1N4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KRT78Q8N1N4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
KRT78Q8N1N4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KRT78Q8N1N4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
KRT78Q8N1N4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
KRT78Q8N1N4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
KRT78Q8N1N4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KRT78Q8N1N4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.54■■□□□ 1.2
KRT78Q8N1N4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.54■■□□□ 1.2
KRT78Q8N1N4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KRT78Q8N1N4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
KRT78Q8N1N4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
KRT78Q8N1N4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
KRT78Q8N1N4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KRT78Q8N1N4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.53■■□□□ 1.2
KRT78Q8N1N4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
KRT78Q8N1N4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KRT78Q8N1N4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.52■■□□□ 1.2
KRT78Q8N1N4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.52■■□□□ 1.2
KRT78Q8N1N4 AL033527.3-201ENST00000566366 1196 ntBASIC22.52■■□□□ 1.2
KRT78Q8N1N4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.52■■□□□ 1.2
KRT78Q8N1N4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.52■■□□□ 1.2
KRT78Q8N1N4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.52■■□□□ 1.2
KRT78Q8N1N4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KRT78Q8N1N4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
KRT78Q8N1N4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.19
KRT78Q8N1N4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 AC022616.5-201ENST00000518796 181 ntBASIC22.51■■□□□ 1.19
KRT78Q8N1N4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.51■■□□□ 1.19
KRT78Q8N1N4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
KRT78Q8N1N4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.5■■□□□ 1.19
KRT78Q8N1N4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KRT78Q8N1N4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KRT78Q8N1N4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.5■■□□□ 1.19
KRT78Q8N1N4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KRT78Q8N1N4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KRT78Q8N1N4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KRT78Q8N1N4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
KRT78Q8N1N4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
KRT78Q8N1N4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms