Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 UNC93B3-201ENST00000308076 687 ntBASIC33.27■■■□□ 2.92
XRN1Q8IZH2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC33.26■■■□□ 2.92
XRN1Q8IZH2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
XRN1Q8IZH2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
XRN1Q8IZH2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
XRN1Q8IZH2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
XRN1Q8IZH2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC33.25■■■□□ 2.91
XRN1Q8IZH2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
XRN1Q8IZH2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
XRN1Q8IZH2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC33.25■■■□□ 2.91
XRN1Q8IZH2 AC024257.2-201ENST00000549699 147 ntBASIC33.25■■■□□ 2.91
XRN1Q8IZH2 MIR6722-201ENST00000617286 78 ntBASIC33.25■■■□□ 2.91
XRN1Q8IZH2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
XRN1Q8IZH2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC33.24■■■□□ 2.91
XRN1Q8IZH2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
XRN1Q8IZH2 EDA-201ENST00000338901 1233 ntBASIC33.24■■■□□ 2.91
XRN1Q8IZH2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
XRN1Q8IZH2 AC105265.2-201ENST00000467189 838 ntBASIC33.24■■■□□ 2.91
XRN1Q8IZH2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC33.24■■■□□ 2.91
XRN1Q8IZH2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
XRN1Q8IZH2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
XRN1Q8IZH2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
XRN1Q8IZH2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC33.22■■■□□ 2.91
XRN1Q8IZH2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC33.22■■■□□ 2.91
XRN1Q8IZH2 MIR5787-201ENST00000611784 55 ntBASIC33.22■■■□□ 2.91
XRN1Q8IZH2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
XRN1Q8IZH2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.91
XRN1Q8IZH2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC33.21■■■□□ 2.91
XRN1Q8IZH2 AP001330.3-201ENST00000520123 633 ntBASIC33.21■■■□□ 2.91
XRN1Q8IZH2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
XRN1Q8IZH2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
XRN1Q8IZH2 FOXO3B-201ENST00000395675 1928 ntBASIC33.21■■■□□ 2.91
XRN1Q8IZH2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC33.2■■■□□ 2.91
XRN1Q8IZH2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
XRN1Q8IZH2 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC33.2■■■□□ 2.91
XRN1Q8IZH2 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC33.2■■■□□ 2.9
XRN1Q8IZH2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
XRN1Q8IZH2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
XRN1Q8IZH2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC33.19■■■□□ 2.9
XRN1Q8IZH2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC33.19■■■□□ 2.9
XRN1Q8IZH2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC33.18■■■□□ 2.9
XRN1Q8IZH2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
XRN1Q8IZH2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
XRN1Q8IZH2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
XRN1Q8IZH2 MIR939-201ENST00000401314 82 ntBASIC33.17■■■□□ 2.9
XRN1Q8IZH2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
XRN1Q8IZH2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC33.17■■■□□ 2.9
XRN1Q8IZH2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
XRN1Q8IZH2 AF213884.3-201ENST00000563833 479 ntBASIC33.16■■■□□ 2.9
XRN1Q8IZH2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC33.16■■■□□ 2.9
XRN1Q8IZH2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC33.15■■■□□ 2.9
XRN1Q8IZH2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC33.15■■■□□ 2.9
XRN1Q8IZH2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC33.15■■■□□ 2.9
XRN1Q8IZH2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC33.15■■■□□ 2.9
XRN1Q8IZH2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC33.14■■■□□ 2.9
XRN1Q8IZH2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
XRN1Q8IZH2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC33.14■■■□□ 2.89
XRN1Q8IZH2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC33.13■■■□□ 2.89
XRN1Q8IZH2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC33.13■■■□□ 2.89
XRN1Q8IZH2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
XRN1Q8IZH2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
XRN1Q8IZH2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
XRN1Q8IZH2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC33.12■■■□□ 2.89
XRN1Q8IZH2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
XRN1Q8IZH2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
XRN1Q8IZH2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
XRN1Q8IZH2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
XRN1Q8IZH2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
XRN1Q8IZH2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC33.12■■■□□ 2.89
XRN1Q8IZH2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC33.12■■■□□ 2.89
XRN1Q8IZH2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
XRN1Q8IZH2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
XRN1Q8IZH2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
XRN1Q8IZH2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
XRN1Q8IZH2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
XRN1Q8IZH2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC33.11■■■□□ 2.89
XRN1Q8IZH2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
XRN1Q8IZH2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
XRN1Q8IZH2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
XRN1Q8IZH2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
XRN1Q8IZH2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC33.09■■■□□ 2.89
XRN1Q8IZH2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC33.09■■■□□ 2.89
XRN1Q8IZH2 AL355001.2-201ENST00000620617 1191 ntBASIC33.09■■■□□ 2.89
XRN1Q8IZH2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC33.09■■■□□ 2.89
XRN1Q8IZH2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
XRN1Q8IZH2 SRD5A1P1-201ENST00000442297 786 ntBASIC33.08■■■□□ 2.89
XRN1Q8IZH2 ANKRD20A6P-201ENST00000618763 204 ntBASIC33.08■■■□□ 2.89
XRN1Q8IZH2 SF1-220ENST00000626028 704 ntTSL 2 BASIC33.08■■■□□ 2.89
XRN1Q8IZH2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC33.08■■■□□ 2.89
XRN1Q8IZH2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC33.08■■■□□ 2.89
XRN1Q8IZH2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
XRN1Q8IZH2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
XRN1Q8IZH2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC33.08■■■□□ 2.89
XRN1Q8IZH2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC33.08■■■□□ 2.89
XRN1Q8IZH2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
XRN1Q8IZH2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
XRN1Q8IZH2 AC090877.2-201ENST00000558441 1738 ntBASIC33.06■■■□□ 2.88
XRN1Q8IZH2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC33.06■■■□□ 2.88
XRN1Q8IZH2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC33.06■■■□□ 2.88
XRN1Q8IZH2 GRAMD4P4-201ENST00000613563 1115 ntBASIC33.06■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms