Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM53AQ6NSI3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.41■□□□□ 0.7
FAM53AQ6NSI3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FAM53AQ6NSI3 AP003733.4-201ENST00000623785 1697 ntBASIC19.4■□□□□ 0.7
FAM53AQ6NSI3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM53AQ6NSI3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.4■□□□□ 0.7
FAM53AQ6NSI3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
FAM53AQ6NSI3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM53AQ6NSI3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM53AQ6NSI3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM53AQ6NSI3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
FAM53AQ6NSI3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.39■□□□□ 0.69
FAM53AQ6NSI3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM53AQ6NSI3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
FAM53AQ6NSI3 DUX4L9-201ENST00000449051 1259 ntBASIC19.39■□□□□ 0.69
FAM53AQ6NSI3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.39■□□□□ 0.69
FAM53AQ6NSI3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FAM53AQ6NSI3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
FAM53AQ6NSI3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
FAM53AQ6NSI3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM53AQ6NSI3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM53AQ6NSI3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM53AQ6NSI3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM53AQ6NSI3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.38■□□□□ 0.69
FAM53AQ6NSI3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM53AQ6NSI3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FAM53AQ6NSI3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.38■□□□□ 0.69
FAM53AQ6NSI3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM53AQ6NSI3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FAM53AQ6NSI3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM53AQ6NSI3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
FAM53AQ6NSI3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
FAM53AQ6NSI3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.37■□□□□ 0.69
FAM53AQ6NSI3 FOXO3B-201ENST00000395675 1928 ntBASIC19.37■□□□□ 0.69
FAM53AQ6NSI3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FAM53AQ6NSI3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM53AQ6NSI3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM53AQ6NSI3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FAM53AQ6NSI3 KRT18P60-201ENST00000312876 1297 ntBASIC19.36■□□□□ 0.69
FAM53AQ6NSI3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FAM53AQ6NSI3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
FAM53AQ6NSI3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.35■□□□□ 0.69
FAM53AQ6NSI3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM53AQ6NSI3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FAM53AQ6NSI3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FAM53AQ6NSI3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FAM53AQ6NSI3 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.35■□□□□ 0.69
FAM53AQ6NSI3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
FAM53AQ6NSI3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FAM53AQ6NSI3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.34■□□□□ 0.69
FAM53AQ6NSI3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FAM53AQ6NSI3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FAM53AQ6NSI3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
FAM53AQ6NSI3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
FAM53AQ6NSI3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
FAM53AQ6NSI3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
FAM53AQ6NSI3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
FAM53AQ6NSI3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
FAM53AQ6NSI3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
FAM53AQ6NSI3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
FAM53AQ6NSI3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
FAM53AQ6NSI3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FAM53AQ6NSI3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.33■□□□□ 0.68
FAM53AQ6NSI3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.33■□□□□ 0.68
FAM53AQ6NSI3 RPS2P7-201ENST00000447334 885 ntBASIC19.33■□□□□ 0.68
FAM53AQ6NSI3 AC018755.3-202ENST00000596210 929 ntBASIC19.33■□□□□ 0.68
FAM53AQ6NSI3 AC129492.7-201ENST00000622992 756 ntBASIC19.33■□□□□ 0.68
FAM53AQ6NSI3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
FAM53AQ6NSI3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
FAM53AQ6NSI3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
FAM53AQ6NSI3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
FAM53AQ6NSI3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 MIR6089-201ENST00000616698 64 ntBASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
FAM53AQ6NSI3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
FAM53AQ6NSI3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
FAM53AQ6NSI3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM53AQ6NSI3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
FAM53AQ6NSI3 HLA-L-211ENST00000482052 1765 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms