Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
EFNB3Q15768 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
EFNB3Q15768 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.08■□□□□ 0.8
EFNB3Q15768 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
EFNB3Q15768 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EFNB3Q15768 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
EFNB3Q15768 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
EFNB3Q15768 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EFNB3Q15768 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EFNB3Q15768 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.07■□□□□ 0.8
EFNB3Q15768 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.07■□□□□ 0.8
EFNB3Q15768 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.07■□□□□ 0.8
EFNB3Q15768 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
EFNB3Q15768 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EFNB3Q15768 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EFNB3Q15768 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EFNB3Q15768 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFNB3Q15768 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
EFNB3Q15768 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EFNB3Q15768 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.06■□□□□ 0.8
EFNB3Q15768 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFNB3Q15768 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFNB3Q15768 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EFNB3Q15768 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.06■□□□□ 0.8
EFNB3Q15768 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.06■□□□□ 0.8
EFNB3Q15768 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFNB3Q15768 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
EFNB3Q15768 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.06■□□□□ 0.8
EFNB3Q15768 DUSP8P4-201ENST00000399538 1761 ntBASIC20.06■□□□□ 0.8
EFNB3Q15768 AC090877.2-201ENST00000558441 1738 ntBASIC20.05■□□□□ 0.8
EFNB3Q15768 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
EFNB3Q15768 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFNB3Q15768 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.05■□□□□ 0.8
EFNB3Q15768 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
EFNB3Q15768 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EFNB3Q15768 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
EFNB3Q15768 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.05■□□□□ 0.8
EFNB3Q15768 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFNB3Q15768 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EFNB3Q15768 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
EFNB3Q15768 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EFNB3Q15768 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
EFNB3Q15768 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EFNB3Q15768 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.04■□□□□ 0.8
EFNB3Q15768 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EFNB3Q15768 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.04■□□□□ 0.8
EFNB3Q15768 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.04■□□□□ 0.8
EFNB3Q15768 AC092028.1-203ENST00000608262 953 ntBASIC20.04■□□□□ 0.8
EFNB3Q15768 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFNB3Q15768 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EFNB3Q15768 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFNB3Q15768 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.03■□□□□ 0.8
EFNB3Q15768 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
EFNB3Q15768 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
EFNB3Q15768 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFNB3Q15768 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFNB3Q15768 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.03■□□□□ 0.8
EFNB3Q15768 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFNB3Q15768 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EFNB3Q15768 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFNB3Q15768 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.02■□□□□ 0.8
EFNB3Q15768 UNC93B8-201ENST00000511903 705 ntBASIC20.02■□□□□ 0.8
EFNB3Q15768 AC131212.1-201ENST00000613771 668 ntBASIC20.02■□□□□ 0.8
EFNB3Q15768 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
EFNB3Q15768 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EFNB3Q15768 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EFNB3Q15768 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.01■□□□□ 0.79
EFNB3Q15768 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.01■□□□□ 0.79
EFNB3Q15768 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.01■□□□□ 0.79
EFNB3Q15768 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.01■□□□□ 0.79
EFNB3Q15768 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.01■□□□□ 0.79
EFNB3Q15768 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
EFNB3Q15768 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20■□□□□ 0.79
EFNB3Q15768 GRAMD4P7-201ENST00000578182 1232 ntBASIC20■□□□□ 0.79
EFNB3Q15768 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
EFNB3Q15768 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EFNB3Q15768 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EFNB3Q15768 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
EFNB3Q15768 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EFNB3Q15768 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFNB3Q15768 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
EFNB3Q15768 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.99■□□□□ 0.79
EFNB3Q15768 KRT16P3-201ENST00000439127 1283 ntBASIC19.99■□□□□ 0.79
EFNB3Q15768 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.99■□□□□ 0.79
EFNB3Q15768 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.99■□□□□ 0.79
EFNB3Q15768 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFNB3Q15768 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EFNB3Q15768 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
EFNB3Q15768 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EFNB3Q15768 AF131216.4-201ENST00000638924 1588 ntBASIC19.99■□□□□ 0.79
EFNB3Q15768 AC145676.1-201ENST00000514988 2004 ntBASIC19.98■□□□□ 0.79
EFNB3Q15768 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.98■□□□□ 0.79
EFNB3Q15768 AC091060.1-201ENST00000623524 1766 ntBASIC19.98■□□□□ 0.79
EFNB3Q15768 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
EFNB3Q15768 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.98■□□□□ 0.79
EFNB3Q15768 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
EFNB3Q15768 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.98■□□□□ 0.79
EFNB3Q15768 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
EFNB3Q15768 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EFNB3Q15768 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms