Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 PAT1YCR077C 2391 nt7.1□□□□□ -1.27
MSH4P40965 CTF18YMR078C 2226 nt7.09□□□□□ -1.27
MSH4P40965 KAR1YNL188W 1302 nt7.09□□□□□ -1.27
MSH4P40965 RTT103YDR289C 1230 nt7.09□□□□□ -1.27
MSH4P40965 ICS3YJL077C 396 nt7.09□□□□□ -1.27
MSH4P40965 YML6YML025C 861 nt7.09□□□□□ -1.27
MSH4P40965 RAD17YOR368W 1206 nt7.09□□□□□ -1.27
MSH4P40965 LSG1YGL099W 1923 nt7.09□□□□□ -1.27
MSH4P40965 TPO3YPR156C 1869 nt7.09□□□□□ -1.28
MSH4P40965 LDS1YAL018C 978 nt7.08□□□□□ -1.28
MSH4P40965 JNM1YMR294W 1122 nt7.08□□□□□ -1.28
MSH4P40965 IES2YNL215W 963 nt7.08□□□□□ -1.28
MSH4P40965 MCH1YDL054C 1461 nt7.08□□□□□ -1.28
MSH4P40965 ARH1YDR376W 1482 nt7.08□□□□□ -1.28
MSH4P40965 LDB19YOR322C 2457 nt7.08□□□□□ -1.28
MSH4P40965 CLD1YGR110W 1338 nt7.07□□□□□ -1.28
MSH4P40965 SRP101YDR292C 1866 nt7.07□□□□□ -1.28
MSH4P40965 GTO1YGR154C 1071 nt7.07□□□□□ -1.28
MSH4P40965 SAW1YAL027W 786 nt7.07□□□□□ -1.28
MSH4P40965 POP5YAL033W 522 nt7.07□□□□□ -1.28
MSH4P40965 XPT1YJR133W 630 nt7.07□□□□□ -1.28
MSH4P40965 YML131WYML131W 1098 nt7.07□□□□□ -1.28
MSH4P40965 HAS1YMR290C 1518 nt7.06□□□□□ -1.28
MSH4P40965 RSC30YHR056C 2652 nt7.06□□□□□ -1.28
MSH4P40965 DFM1YDR411C 1026 nt7.06□□□□□ -1.28
MSH4P40965 HSP150YJL159W 1242 nt7.06□□□□□ -1.28
MSH4P40965 SPC42YKL042W 1092 nt7.06□□□□□ -1.28
MSH4P40965 YIP3YNL044W 531 nt7.06□□□□□ -1.28
MSH4P40965 PFA4YOL003C 1137 nt7.06□□□□□ -1.28
MSH4P40965 MNS1YJR131W 1650 nt7.06□□□□□ -1.28
MSH4P40965 SIT1YEL065W 1887 nt7.05□□□□□ -1.28
MSH4P40965 PRS2YER099C 957 nt7.05□□□□□ -1.28
MSH4P40965 CDA2YLR308W 939 nt7.05□□□□□ -1.28
MSH4P40965 HIS7YBR248C 1659 nt7.05□□□□□ -1.28
MSH4P40965 YDR132CYDR132C 1488 nt7.04□□□□□ -1.28
MSH4P40965 EXG1YLR300W 1347 nt7.04□□□□□ -1.28
MSH4P40965 SMF3YLR034C 1422 nt7.04□□□□□ -1.28
MSH4P40965 HMLALPHA1YCL066W 528 nt7.04□□□□□ -1.28
MSH4P40965 MATALPHA1YCR040W 528 nt7.04□□□□□ -1.28
MSH4P40965 DIN7YDR263C 1293 nt7.04□□□□□ -1.28
MSH4P40965 LSM6YDR378C 261 nt7.04□□□□□ -1.28
MSH4P40965 TMT1YER175C 900 nt7.04□□□□□ -1.28
MSH4P40965 MTG1YMR097C 1104 nt7.04□□□□□ -1.28
MSH4P40965 RDL2YOR286W 450 nt7.04□□□□□ -1.28
MSH4P40965 RRS1YOR294W 612 nt7.04□□□□□ -1.28
MSH4P40965 OAZ1YPL052W 879 nt7.04□□□□□ -1.28
MSH4P40965 YBR089WYBR089W 600 nt7.04□□□□□ -1.28
MSH4P40965 HRQ1YDR291W 3234 nt7.04□□□□□ -1.28
MSH4P40965 MSS1YMR023C 1581 nt7.03□□□□□ -1.28
MSH4P40965 PFK2YMR205C 2880 nt7.03□□□□□ -1.28
MSH4P40965 HXT17YNR072W 1695 nt7.03□□□□□ -1.28
MSH4P40965 AFG1YEL052W 1530 nt7.03□□□□□ -1.28
MSH4P40965 DON1YDR273W 1098 nt7.03□□□□□ -1.28
MSH4P40965 KRE9YJL174W 831 nt7.03□□□□□ -1.28
MSH4P40965 ASK1YKL052C 879 nt7.03□□□□□ -1.28
MSH4P40965 MTC2YKL098W 1074 nt7.03□□□□□ -1.28
MSH4P40965 CIN4YMR138W 576 nt7.03□□□□□ -1.28
MSH4P40965 CHL4YDR254W 1377 nt7.03□□□□□ -1.28
MSH4P40965 ADE12YNL220W 1302 nt7.02□□□□□ -1.28
MSH4P40965 SPO77YLR341W 1434 nt7.02□□□□□ -1.29
MSH4P40965 MRPL25YGR076C 474 nt7.02□□□□□ -1.29
MSH4P40965 SEC28YIL076W 891 nt7.02□□□□□ -1.29
MSH4P40965 YMC1YPR058W 924 nt7.02□□□□□ -1.29
MSH4P40965 PMT2YAL023C 2280 nt7.01□□□□□ -1.29
MSH4P40965 SEC18YBR080C 2277 nt7.01□□□□□ -1.29
MSH4P40965 MMR1YLR190W 1476 nt7.01□□□□□ -1.29
MSH4P40965 UGX2YDL169C 672 nt7.01□□□□□ -1.29
MSH4P40965 UPS3YDR185C 540 nt7.01□□□□□ -1.29
MSH4P40965 PCL6YER059W 1263 nt7.01□□□□□ -1.29
MSH4P40965 RPN11YFR004W 921 nt7.01□□□□□ -1.29
MSH4P40965 ADH4YGL256W 1149 nt7.01□□□□□ -1.29
MSH4P40965 MRP13YGR084C 1020 nt7.01□□□□□ -1.29
MSH4P40965 ATG19YOL082W 1248 nt7.01□□□□□ -1.29
MSH4P40965 PGM1YKL127W 1713 nt7.01□□□□□ -1.29
MSH4P40965 CMK1YFR014C 1341 nt7.01□□□□□ -1.29
MSH4P40965 VPS61YDR136C 573 nt7□□□□□ -1.29
MSH4P40965 DUS4YLR405W 1104 nt7□□□□□ -1.29
MSH4P40965 YGP1YNL160W 1065 nt7□□□□□ -1.29
MSH4P40965 YOR020W-AYOR020W-A 273 nt7□□□□□ -1.29
MSH4P40965 SCP1YOR367W 603 nt7□□□□□ -1.29
MSH4P40965 MTC5YDR128W 3447 nt6.99□□□□□ -1.29
MSH4P40965 MST1YKL194C 1389 nt6.99□□□□□ -1.29
MSH4P40965 YTP1YNL237W 1380 nt6.99□□□□□ -1.29
MSH4P40965 YCK1YHR135C 1617 nt6.99□□□□□ -1.29
MSH4P40965 MRPL32YCR003W 552 nt6.99□□□□□ -1.29
MSH4P40965 YDR034W-BYDR034W-B 156 nt6.99□□□□□ -1.29
MSH4P40965 YHL045WYHL045W 348 nt6.99□□□□□ -1.29
MSH4P40965 DMA1YHR115C 1251 nt6.99□□□□□ -1.29
MSH4P40965 COA1YIL157C 594 nt6.99□□□□□ -1.29
MSH4P40965 SPO7YAL009W 780 nt6.99□□□□□ -1.29
MSH4P40965 YKR073CYKR073C 321 nt6.99□□□□□ -1.29
MSH4P40965 YNL042W-BYNL042W-B 258 nt6.99□□□□□ -1.29
MSH4P40965 PYC2YBR218C 3543 nt6.99□□□□□ -1.29
MSH4P40965 WTM1YOR230W 1314 nt6.99□□□□□ -1.29
MSH4P40965 GPI11YDR302W 660 nt6.98□□□□□ -1.29
MSH4P40965 GTR1YML121W 933 nt6.98□□□□□ -1.29
MSH4P40965 MTF1YMR228W 1026 nt6.98□□□□□ -1.29
MSH4P40965 MRPS16YPL013C 366 nt6.98□□□□□ -1.29
MSH4P40965 RPL21AYBR191W 483 nt6.98□□□□□ -1.29
MSH4P40965 NUF2YOL069W 1356 nt6.97□□□□□ -1.29
Retrieved 100 of 7,029 protein–RNA pairs in 52.9 ms