RNA–Protein interactions for RNA: YLR034C

SMF3, Transcript of Putative divalent metal ion transporter involved in iron homeostasis, yeastyeast

Gene SMF3, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF3YLR034C MTC1P47018 478 aaKnown RBP16.38■□□□□ 0.21
SMF3YLR034C DRS1P32892 752 aaKnown RBP16.13■□□□□ 0.17
SMF3YLR034C BFR2Q06631 534 aaKnown RBP13.84□□□□□ -0.19
SMF3YLR034C DIP2Q12220 943 aaPredicted RBP13.82□□□□□ -0.2
SMF3YLR034C AVT3P36062 692 aa13.65□□□□□ -0.22
SMF3YLR034C FAP1P53971 965 aa13.57□□□□□ -0.24
SMF3YLR034C ISW2Q08773 1120 aa13.33□□□□□ -0.28
SMF3YLR034C PRI1P10363 409 aa13.3□□□□□ -0.28
SMF3YLR034C RPG1P38249 964 aaKnown RBP13.15□□□□□ -0.3
SMF3YLR034C RSE1Q04693 1361 aaKnown RBP13.13□□□□□ -0.31
SMF3YLR034C AAD16Q02895 342 aa13.07□□□□□ -0.32
SMF3YLR034C TFA1P36100 482 aa12.94□□□□□ -0.34
SMF3YLR034C PRY3P47033 881 aa12.74□□□□□ -0.37
SMF3YLR034C RPL17AP05740 184 aaKnown RBP12.64□□□□□ -0.39
SMF3YLR034C RPL17BP46990 184 aaKnown RBP12.64□□□□□ -0.39
SMF3YLR034C TSR3Q12094 313 aaKnown RBP12.55□□□□□ -0.4
SMF3YLR034C REB1P21538 810 aa12.46□□□□□ -0.41
SMF3YLR034C SPT21P35209 758 aa12.26□□□□□ -0.45
SMF3YLR034C YCK3P39962 524 aa12.2□□□□□ -0.46
SMF3YLR034C HAA1Q12753 694 aaKnown RBP12.08□□□□□ -0.48
SMF3YLR034C MRPL32P25348 183 aa12.06□□□□□ -0.48
SMF3YLR034C RIM101P33400 625 aa12.02□□□□□ -0.49
SMF3YLR034C YKR023WP36119 530 aaKnown RBP11.87□□□□□ -0.51
SMF3YLR034C CDC27P38042 758 aa11.67□□□□□ -0.54
SMF3YLR034C TFC8Q12308 588 aa11.63□□□□□ -0.55
SMF3YLR034C OXP1P28273 1286 aa11.61□□□□□ -0.55
SMF3YLR034C HOP09932 586 aa11.56□□□□□ -0.56
SMF3YLR034C DCD1P06773 312 aa11.46□□□□□ -0.57
SMF3YLR034C YIL055CP40523 627 aaKnown RBP11.36□□□□□ -0.59
SMF3YLR034C YGL015CP33199 130 aa11.34□□□□□ -0.59
SMF3YLR034C SSP1P38871 571 aa11.33□□□□□ -0.6
SMF3YLR034C PTP3P40048 928 aa11.32□□□□□ -0.6
SMF3YLR034C YAH1Q12184 172 aaKnown RBP11.3□□□□□ -0.6
SMF3YLR034C UBP10P53874 792 aaPredicted RBP11.27□□□□□ -0.6
SMF3YLR034C BCH2P36122 765 aa11.26□□□□□ -0.61
SMF3YLR034C RSM7P47150 247 aa11.25□□□□□ -0.61
SMF3YLR034C YLR271WQ06152 274 aa11.24□□□□□ -0.61
SMF3YLR034C MAP2P38174 421 aaKnown RBP11.18□□□□□ -0.62
SMF3YLR034C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.15□□□□□ -0.62not detected
SMF3YLR034C SCY1P53009 804 aa11.1□□□□□ -0.63
SMF3YLR034C AI2P03876 854 aa11.07□□□□□ -0.64
SMF3YLR034C EPS1P40557 701 aa11.05□□□□□ -0.64
SMF3YLR034C PSD2P53037 1138 aaKnown RBP11.01□□□□□ -0.65
SMF3YLR034C BBC1P47068 1157 aa11□□□□□ -0.65
SMF3YLR034C BDF1P35817 686 aa10.98□□□□□ -0.65
SMF3YLR034C MGA2P40578 1113 aa10.96□□□□□ -0.65
SMF3YLR034C SLX5P32828 619 aaKnown RBP10.92□□□□□ -0.66
SMF3YLR034C CST9Q06032 482 aa10.87□□□□□ -0.67
SMF3YLR034C TIF4632P39936 914 aaKnown RBP10.74□□□□□ -0.69
SMF3YLR034C TGL3P40308 642 aa10.71□□□□□ -0.69
SMF3YLR034C MRM1P25270 412 aa10.7□□□□□ -0.7
SMF3YLR034C RQC2Q12532 1038 aaKnown RBP10.62□□□□□ -0.71
SMF3YLR034C NSR1P27476 414 aaKnown RBP RIP-Chip data10.6□□□□□ -0.71not detected
SMF3YLR034C RTG3P38165 486 aa10.56□□□□□ -0.72
SMF3YLR034C RCR1P38212 213 aa10.52□□□□□ -0.73
SMF3YLR034C VPS29P38759 282 aa10.5□□□□□ -0.73
SMF3YLR034C RAM2P29703 316 aa10.48□□□□□ -0.73
SMF3YLR034C DMA1P38823 416 aa10.47□□□□□ -0.73
SMF3YLR034C YAP5P40574 245 aa10.44□□□□□ -0.74
SMF3YLR034C MST1P07236 462 aa10.41□□□□□ -0.74
SMF3YLR034C YMR1P47147 688 aaKnown RBP RIP-Chip data10.41□□□□□ -0.74not detected
SMF3YLR034C YOR238WQ08634 303 aa10.38□□□□□ -0.75
SMF3YLR034C MAK11P20484 414 aaKnown RBP10.35□□□□□ -0.75
SMF3YLR034C STS1P38637 319 aa10.35□□□□□ -0.75
SMF3YLR034C DBP1P24784 617 aaKnown RBP10.32□□□□□ -0.76
SMF3YLR034C YFR006WP43590 535 aa10.26□□□□□ -0.77
SMF3YLR034C PIB1Q06651 286 aa10.22□□□□□ -0.77
SMF3YLR034C VMA1P17255 1071 aaKnown RBP10.18□□□□□ -0.78
SMF3YLR034C COQ8P27697 501 aa10.18□□□□□ -0.78
SMF3YLR034C SET1P38827 1080 aaKnown RBP10.16□□□□□ -0.78
SMF3YLR034C NOP53Q12080 455 aaKnown RBP10.16□□□□□ -0.78
SMF3YLR034C EDS1P38073 919 aa10.15□□□□□ -0.79
SMF3YLR034C SAM3Q08986 587 aa10.14□□□□□ -0.79
SMF3YLR034C SAS10Q12136 610 aaPredicted RBP10.13□□□□□ -0.79
SMF3YLR034C GTT3P39996 337 aa10.12□□□□□ -0.79
SMF3YLR034C MIF2P35201 549 aa10.09□□□□□ -0.79
SMF3YLR034C YPR148CQ06523 435 aa10.08□□□□□ -0.8
SMF3YLR034C PTC3P34221 468 aaKnown RBP10.06□□□□□ -0.8
SMF3YLR034C UBP9P39967 754 aa10.06□□□□□ -0.8
SMF3YLR034C IFH1P39520 1085 aa10.04□□□□□ -0.8
SMF3YLR034C BUD31P25337 157 aaPredicted RBP10.03□□□□□ -0.8
SMF3YLR034C YOL036WQ08206 761 aa10.01□□□□□ -0.81
SMF3YLR034C MSB4Q12317 492 aa10.01□□□□□ -0.81
SMF3YLR034C YBL029C-AQ3E756 94 aa10□□□□□ -0.81
SMF3YLR034C VNX1P42839 908 aa9.99□□□□□ -0.81
SMF3YLR034C WSC3Q12215 556 aa9.97□□□□□ -0.81
SMF3YLR034C ABP1P15891 592 aaKnown RBP9.96□□□□□ -0.82
SMF3YLR034C GRE2Q12068 342 aaKnown RBP9.96□□□□□ -0.82
SMF3YLR034C GYP5Q12344 894 aa9.96□□□□□ -0.82
SMF3YLR034C GUT1P32190 709 aa9.93□□□□□ -0.82
SMF3YLR034C SET4P42948 560 aa9.93□□□□□ -0.82
SMF3YLR034C ATH1P48016 1211 aa9.91□□□□□ -0.82
SMF3YLR034C TIF11P38912 153 aaKnown RBP9.9□□□□□ -0.83
SMF3YLR034C VPS70P47161 811 aa9.9□□□□□ -0.83
SMF3YLR034C EAP1P36041 632 aaKnown RBP9.89□□□□□ -0.83
SMF3YLR034C CKB1P43639 278 aa9.86□□□□□ -0.83
SMF3YLR034C SPP1Q03012 353 aa9.86□□□□□ -0.83
SMF3YLR034C HTA1P04911 132 aaKnown RBP9.84□□□□□ -0.83
SMF3YLR034C HTA2P04912 132 aa9.84□□□□□ -0.83
SMF3YLR034C NST1P53935 1240 aa9.84□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms