Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 MIR4466-201ENST00000606121 54 ntBASIC25.33■■□□□ 1.65
PBX3P40426 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PBX3P40426 ERN1-208ENST00000606895 2068 ntBASIC25.32■■□□□ 1.64
PBX3P40426 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PBX3P40426 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.31■■□□□ 1.64
PBX3P40426 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PBX3P40426 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.31■■□□□ 1.64
PBX3P40426 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PBX3P40426 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.31■■□□□ 1.64
PBX3P40426 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PBX3P40426 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PBX3P40426 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PBX3P40426 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PBX3P40426 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PBX3P40426 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PBX3P40426 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PBX3P40426 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.3■■□□□ 1.64
PBX3P40426 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PBX3P40426 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PBX3P40426 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
PBX3P40426 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PBX3P40426 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PBX3P40426 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PBX3P40426 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PBX3P40426 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.29■■□□□ 1.64
PBX3P40426 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.29■■□□□ 1.64
PBX3P40426 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.29■■□□□ 1.64
PBX3P40426 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.29■■□□□ 1.64
PBX3P40426 AL356740.2-201ENST00000601559 647 ntBASIC25.29■■□□□ 1.64
PBX3P40426 AC110285.6-201ENST00000617652 491 ntBASIC25.29■■□□□ 1.64
PBX3P40426 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PBX3P40426 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PBX3P40426 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.28■■□□□ 1.64
PBX3P40426 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.28■■□□□ 1.64
PBX3P40426 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.28■■□□□ 1.64
PBX3P40426 SSSCA1-AS1-201ENST00000567594 614 ntBASIC25.28■■□□□ 1.64
PBX3P40426 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PBX3P40426 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PBX3P40426 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.28■■□□□ 1.64
PBX3P40426 AC096887.2-201ENST00000623443 1957 ntBASIC25.27■■□□□ 1.64
PBX3P40426 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PBX3P40426 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PBX3P40426 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PBX3P40426 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.27■■□□□ 1.64
PBX3P40426 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PBX3P40426 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PBX3P40426 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PBX3P40426 AC096631.2-201ENST00000436136 790 ntBASIC25.26■■□□□ 1.63
PBX3P40426 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.26■■□□□ 1.63
PBX3P40426 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.26■■□□□ 1.63
PBX3P40426 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.26■■□□□ 1.63
PBX3P40426 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PBX3P40426 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PBX3P40426 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PBX3P40426 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.26■■□□□ 1.63
PBX3P40426 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PBX3P40426 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.25■■□□□ 1.63
PBX3P40426 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.25■■□□□ 1.63
PBX3P40426 AL512631.2-201ENST00000604634 923 ntBASIC25.25■■□□□ 1.63
PBX3P40426 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.25■■□□□ 1.63
PBX3P40426 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
PBX3P40426 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PBX3P40426 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
PBX3P40426 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.24■■□□□ 1.63
PBX3P40426 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PBX3P40426 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.24■■□□□ 1.63
PBX3P40426 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
PBX3P40426 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.23■■□□□ 1.63
PBX3P40426 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.23■■□□□ 1.63
PBX3P40426 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PBX3P40426 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
PBX3P40426 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PBX3P40426 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PBX3P40426 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
PBX3P40426 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.22■■□□□ 1.63
PBX3P40426 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.22■■□□□ 1.63
PBX3P40426 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PBX3P40426 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PBX3P40426 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.22■■□□□ 1.63
PBX3P40426 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PBX3P40426 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PBX3P40426 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PBX3P40426 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.21■■□□□ 1.63
PBX3P40426 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.21■■□□□ 1.63
PBX3P40426 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
PBX3P40426 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
PBX3P40426 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
PBX3P40426 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PBX3P40426 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PBX3P40426 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PBX3P40426 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.2■■□□□ 1.62
PBX3P40426 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PBX3P40426 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PBX3P40426 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PBX3P40426 AC090877.2-201ENST00000558441 1738 ntBASIC25.19■■□□□ 1.62
PBX3P40426 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PBX3P40426 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PBX3P40426 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
PBX3P40426 AL121749.1-202ENST00000609313 2153 ntBASIC25.18■■□□□ 1.62
PBX3P40426 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.18■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms