Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.64■■□□□ 1.05
CEACAM4O75871 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CEACAM4O75871 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.63■■□□□ 1.05
CEACAM4O75871 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CEACAM4O75871 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CEACAM4O75871 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.63■■□□□ 1.05
CEACAM4O75871 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CEACAM4O75871 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CEACAM4O75871 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CEACAM4O75871 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CEACAM4O75871 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CEACAM4O75871 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CEACAM4O75871 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.62■■□□□ 1.05
CEACAM4O75871 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.62■■□□□ 1.05
CEACAM4O75871 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.62■■□□□ 1.05
CEACAM4O75871 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.62■■□□□ 1.05
CEACAM4O75871 AC090877.2-201ENST00000558441 1738 ntBASIC21.62■■□□□ 1.05
CEACAM4O75871 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CEACAM4O75871 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.61■■□□□ 1.05
CEACAM4O75871 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CEACAM4O75871 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CEACAM4O75871 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CEACAM4O75871 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.61■■□□□ 1.05
CEACAM4O75871 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CEACAM4O75871 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CEACAM4O75871 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.6■■□□□ 1.05
CEACAM4O75871 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.6■■□□□ 1.05
CEACAM4O75871 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CEACAM4O75871 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.6■■□□□ 1.05
CEACAM4O75871 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CEACAM4O75871 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CEACAM4O75871 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CEACAM4O75871 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CEACAM4O75871 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.58■■□□□ 1.05
CEACAM4O75871 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CEACAM4O75871 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CEACAM4O75871 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.58■■□□□ 1.04
CEACAM4O75871 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.58■■□□□ 1.04
CEACAM4O75871 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CEACAM4O75871 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CEACAM4O75871 AC106739.1-201ENST00000617035 715 ntBASIC21.57■■□□□ 1.04
CEACAM4O75871 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.57■■□□□ 1.04
CEACAM4O75871 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CEACAM4O75871 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CEACAM4O75871 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.56■■□□□ 1.04
CEACAM4O75871 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CEACAM4O75871 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CEACAM4O75871 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.56■■□□□ 1.04
CEACAM4O75871 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CEACAM4O75871 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CEACAM4O75871 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CEACAM4O75871 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CEACAM4O75871 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.55■■□□□ 1.04
CEACAM4O75871 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.55■■□□□ 1.04
CEACAM4O75871 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.55■■□□□ 1.04
CEACAM4O75871 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.55■■□□□ 1.04
CEACAM4O75871 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CEACAM4O75871 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CEACAM4O75871 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CEACAM4O75871 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.55■■□□□ 1.04
CEACAM4O75871 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CEACAM4O75871 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.54■■□□□ 1.04
CEACAM4O75871 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.54■■□□□ 1.04
CEACAM4O75871 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.54■■□□□ 1.04
CEACAM4O75871 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.54■■□□□ 1.04
CEACAM4O75871 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.53■■□□□ 1.04
CEACAM4O75871 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CEACAM4O75871 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CEACAM4O75871 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CEACAM4O75871 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CEACAM4O75871 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CEACAM4O75871 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CEACAM4O75871 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CEACAM4O75871 PBX2P1-201ENST00000493219 1291 ntBASIC21.51■■□□□ 1.03
CEACAM4O75871 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.51■■□□□ 1.03
CEACAM4O75871 AC097639.1-201ENST00000565519 1891 ntBASIC21.51■■□□□ 1.03
CEACAM4O75871 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CEACAM4O75871 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CEACAM4O75871 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CEACAM4O75871 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CEACAM4O75871 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CEACAM4O75871 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.5■■□□□ 1.03
CEACAM4O75871 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.5■■□□□ 1.03
CEACAM4O75871 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CEACAM4O75871 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.5■■□□□ 1.03
CEACAM4O75871 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CEACAM4O75871 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.49■■□□□ 1.03
CEACAM4O75871 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CEACAM4O75871 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CEACAM4O75871 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.49■■□□□ 1.03
CEACAM4O75871 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CEACAM4O75871 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.49■■□□□ 1.03
CEACAM4O75871 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.49■■□□□ 1.03
CEACAM4O75871 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CEACAM4O75871 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CEACAM4O75871 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CEACAM4O75871 AC096887.2-201ENST00000623443 1957 ntBASIC21.48■■□□□ 1.03
CEACAM4O75871 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CEACAM4O75871 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CEACAM4O75871 UNC93B3-201ENST00000308076 687 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms