Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA1O15239 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NDUFA1O15239 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA1O15239 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NDUFA1O15239 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC15.98■□□□□ 0.15
NDUFA1O15239 SLC6A10P-202ENST00000431994 2058 ntBASIC15.98■□□□□ 0.15
NDUFA1O15239 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA1O15239 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NDUFA1O15239 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA1O15239 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA1O15239 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA1O15239 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA1O15239 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA1O15239 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.97■□□□□ 0.15
NDUFA1O15239 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC15.97■□□□□ 0.15
NDUFA1O15239 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NDUFA1O15239 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA1O15239 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA1O15239 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
NDUFA1O15239 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NDUFA1O15239 HLA-V-202ENST00000446817 847 ntBASIC15.96■□□□□ 0.15
NDUFA1O15239 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
NDUFA1O15239 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NDUFA1O15239 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
NDUFA1O15239 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC15.96■□□□□ 0.14
NDUFA1O15239 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NDUFA1O15239 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA1O15239 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.95■□□□□ 0.14
NDUFA1O15239 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NDUFA1O15239 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NDUFA1O15239 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
NDUFA1O15239 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NDUFA1O15239 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA1O15239 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA1O15239 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA1O15239 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
NDUFA1O15239 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA1O15239 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA1O15239 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA1O15239 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NDUFA1O15239 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA1O15239 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA1O15239 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA1O15239 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA1O15239 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA1O15239 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA1O15239 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.94■□□□□ 0.14
NDUFA1O15239 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA1O15239 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NDUFA1O15239 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA1O15239 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.94■□□□□ 0.14
NDUFA1O15239 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC15.94■□□□□ 0.14
NDUFA1O15239 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NDUFA1O15239 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.93■□□□□ 0.14
NDUFA1O15239 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA1O15239 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA1O15239 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA1O15239 AL359504.2-201ENST00000605506 1601 ntBASIC15.93■□□□□ 0.14
NDUFA1O15239 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NDUFA1O15239 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA1O15239 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA1O15239 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NDUFA1O15239 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA1O15239 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.92■□□□□ 0.14
NDUFA1O15239 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NDUFA1O15239 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.92■□□□□ 0.14
NDUFA1O15239 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA1O15239 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA1O15239 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA1O15239 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NDUFA1O15239 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA1O15239 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA1O15239 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC15.91■□□□□ 0.14
NDUFA1O15239 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA1O15239 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA1O15239 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC15.91■□□□□ 0.14
NDUFA1O15239 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC15.91■□□□□ 0.14
NDUFA1O15239 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA1O15239 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA1O15239 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA1O15239 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA1O15239 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.91■□□□□ 0.14
NDUFA1O15239 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA1O15239 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NDUFA1O15239 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NDUFA1O15239 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDUFA1O15239 AC004812.2-201ENST00000611079 2094 ntBASIC15.9■□□□□ 0.14
NDUFA1O15239 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDUFA1O15239 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDUFA1O15239 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.9■□□□□ 0.14
NDUFA1O15239 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NDUFA1O15239 CR559946.2-201ENST00000623684 991 ntBASIC15.9■□□□□ 0.14
NDUFA1O15239 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
NDUFA1O15239 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NDUFA1O15239 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
NDUFA1O15239 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.9■□□□□ 0.14
NDUFA1O15239 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NDUFA1O15239 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NDUFA1O15239 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
NDUFA1O15239 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms