Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TBC1D3EA0A087X179 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3EA0A087X179 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.49■■□□□ 1.35
TBC1D3EA0A087X179 AC010997.5-201ENST00000609182 354 ntBASIC23.49■■□□□ 1.35
TBC1D3EA0A087X179 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3EA0A087X179 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3EA0A087X179 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3EA0A087X179 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.49■■□□□ 1.35
TBC1D3EA0A087X179 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.49■■□□□ 1.35
TBC1D3EA0A087X179 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 MTDHP2-201ENST00000601468 714 ntBASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3EA0A087X179 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TBC1D3EA0A087X179 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
TBC1D3EA0A087X179 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.47■■□□□ 1.35
TBC1D3EA0A087X179 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
TBC1D3EA0A087X179 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.47■■□□□ 1.35
TBC1D3EA0A087X179 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TBC1D3EA0A087X179 AC092803.2-201ENST00000564287 1899 ntBASIC23.47■■□□□ 1.35
TBC1D3EA0A087X179 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TBC1D3EA0A087X179 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D3EA0A087X179 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D3EA0A087X179 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
TBC1D3EA0A087X179 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.46■■□□□ 1.35
TBC1D3EA0A087X179 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.46■■□□□ 1.35
TBC1D3EA0A087X179 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
TBC1D3EA0A087X179 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D3EA0A087X179 AC090877.2-201ENST00000558441 1738 ntBASIC23.46■■□□□ 1.35
TBC1D3EA0A087X179 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.46■■□□□ 1.35
TBC1D3EA0A087X179 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TBC1D3EA0A087X179 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.45■■□□□ 1.34
TBC1D3EA0A087X179 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D3EA0A087X179 AF131216.4-201ENST00000638924 1588 ntBASIC23.44■■□□□ 1.34
TBC1D3EA0A087X179 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D3EA0A087X179 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.44■■□□□ 1.34
TBC1D3EA0A087X179 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D3EA0A087X179 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
TBC1D3EA0A087X179 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3EA0A087X179 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3EA0A087X179 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
TBC1D3EA0A087X179 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3EA0A087X179 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.43■■□□□ 1.34
TBC1D3EA0A087X179 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.43■■□□□ 1.34
TBC1D3EA0A087X179 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3EA0A087X179 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3EA0A087X179 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D3EA0A087X179 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D3EA0A087X179 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.42■■□□□ 1.34
TBC1D3EA0A087X179 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.42■■□□□ 1.34
TBC1D3EA0A087X179 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D3EA0A087X179 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
TBC1D3EA0A087X179 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 MIR6724-1-201ENST00000616420 92 ntBASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 MIR6724-2-201ENST00000616483 92 ntBASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 MIR6724-4-201ENST00000617390 92 ntBASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 MIR6724-3-201ENST00000622482 92 ntBASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.41■■□□□ 1.34
TBC1D3EA0A087X179 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3EA0A087X179 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.4■■□□□ 1.34
TBC1D3EA0A087X179 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3EA0A087X179 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.4■■□□□ 1.34
TBC1D3EA0A087X179 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.4■■□□□ 1.34
TBC1D3EA0A087X179 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3EA0A087X179 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3EA0A087X179 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3EA0A087X179 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
TBC1D3EA0A087X179 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
TBC1D3EA0A087X179 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
TBC1D3EA0A087X179 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.39■■□□□ 1.34
TBC1D3EA0A087X179 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TBC1D3EA0A087X179 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TBC1D3EA0A087X179 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.39■■□□□ 1.33
TBC1D3EA0A087X179 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.39■■□□□ 1.33
TBC1D3EA0A087X179 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.39■■□□□ 1.33
TBC1D3EA0A087X179 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TBC1D3EA0A087X179 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TBC1D3EA0A087X179 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D3EA0A087X179 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.38■■□□□ 1.33
TBC1D3EA0A087X179 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.38■■□□□ 1.33
TBC1D3EA0A087X179 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.38■■□□□ 1.33
TBC1D3EA0A087X179 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms