Protein–RNA interactions for Protein: Q6ZN17

LIN28B, Protein lin-28 homolog B, humanhuman

Known RBP eCLIP

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28BQ6ZN17 TSG101-211ENST00000580814 441 ntTSL 25.33□□□□□ -1.567e-6■□□□□ 10.9
LIN28BQ6ZN17 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.577e-6■□□□□ 10.9
LIN28BQ6ZN17 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.93□□□□□ -1.627e-6■□□□□ 10.9
LIN28BQ6ZN17 MECP2-223ENST00000637791 101 ntTSL 54.89□□□□□ -1.637e-6■□□□□ 10.9
LIN28BQ6ZN17 TSG101-205ENST00000540555 571 ntTSL 24.62□□□□□ -1.677e-6■□□□□ 10.9
LIN28BQ6ZN17 FRRS1-204ENST00000492943 440 ntTSL 54.53□□□□□ -1.687e-6■□□□□ 10.9
LIN28BQ6ZN17 ETF1-208ENST00000514005 608 ntTSL 54.36□□□□□ -1.717e-6■□□□□ 10.9
LIN28BQ6ZN17 PPWD1-204ENST00000505380 829 ntTSL 34.34□□□□□ -1.717e-6■□□□□ 10.9
LIN28BQ6ZN17 PPWD1-205ENST00000507608 987 ntTSL 34.34□□□□□ -1.717e-6■□□□□ 10.9
LIN28BQ6ZN17 RBBP7-201ENST00000330735 858 ntTSL 24.31□□□□□ -1.727e-6■□□□□ 10.9
LIN28BQ6ZN17 PRDX4-204ENST00000439422 554 ntTSL 34.29□□□□□ -1.727e-8■□□□□ 10.9
LIN28BQ6ZN17 CAPZA2-204ENST00000426421 1214 ntTSL 53.84□□□□□ -1.797e-6■□□□□ 10.9
LIN28BQ6ZN17 CAPZA2-203ENST00000417431 517 ntTSL 33.69□□□□□ -1.827e-6■□□□□ 10.9
LIN28BQ6ZN17 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.56□□□□□ -1.847e-6■□□□□ 10.9
LIN28BQ6ZN17 CAPZA2-208ENST00000464669 898 ntTSL 23.56□□□□□ -1.847e-6■□□□□ 10.9
LIN28BQ6ZN17 CAPZA2-205ENST00000449080 814 ntTSL 53.46□□□□□ -1.867e-6■□□□□ 10.9
LIN28BQ6ZN17 CAPZA2-207ENST00000464223 164 ntTSL 1 (best)3.26□□□□□ -1.897e-6■□□□□ 10.9
LIN28BQ6ZN17 MECP2-222ENST00000637533 140 ntTSL 51.37□□□□□ -2.197e-6■□□□□ 10.9
LIN28BQ6ZN17 MECP2-221ENST00000637467 101 ntTSL 50.89□□□□□ -2.277e-6■□□□□ 10.9
LIN28BQ6ZN17 PSMC3-208ENST00000530887 891 ntTSL 220.94■□□□□ 0.944e-6■□□□□ 10.9
LIN28BQ6ZN17 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.454e-6■□□□□ 10.9
LIN28BQ6ZN17 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.334e-6■□□□□ 10.9
LIN28BQ6ZN17 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.91■□□□□ 0.34e-6■□□□□ 10.9
LIN28BQ6ZN17 PSMC3-202ENST00000524447 935 ntTSL 316.68■□□□□ 0.264e-6■□□□□ 10.9
LIN28BQ6ZN17 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.134e-6■□□□□ 10.9
LIN28BQ6ZN17 PSMC3-207ENST00000530651 905 ntTSL 514.89□□□□□ -0.034e-6■□□□□ 10.9
LIN28BQ6ZN17 PSMC3-210ENST00000531051 777 ntTSL 514.22□□□□□ -0.134e-6■□□□□ 10.9
LIN28BQ6ZN17 FDPS-216ENST00000491013 912 ntTSL 516.52■□□□□ 0.247e-10■□□□□ 10.9
LIN28BQ6ZN17 FDPS-211ENST00000477057 741 ntTSL 214.11□□□□□ -0.157e-10■□□□□ 10.9
LIN28BQ6ZN17 NR2F2-AS1-202ENST00000557863 515 ntTSL 317.79■□□□□ 0.443e-12■□□□□ 10.9
LIN28BQ6ZN17 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC13.85□□□□□ -0.193e-12■□□□□ 10.9
LIN28BQ6ZN17 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC11.46□□□□□ -0.583e-12■□□□□ 10.9
LIN28BQ6ZN17 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC10.78□□□□□ -0.683e-12■□□□□ 10.9
LIN28BQ6ZN17 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.24□□□□□ -1.253e-12■□□□□ 10.9
LIN28BQ6ZN17 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.08□□□□□ -1.763e-12■□□□□ 10.9
LIN28BQ6ZN17 PFDN4-205ENST00000493356 659 ntTSL 324.99■■□□□ 1.599e-8■□□□□ 10.9
LIN28BQ6ZN17 PFDN4-204ENST00000487129 762 ntTSL 217.57■□□□□ 0.49e-8■□□□□ 10.9
LIN28BQ6ZN17 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.49e-8■□□□□ 10.9
LIN28BQ6ZN17 PFDN4-202ENST00000441080 579 ntTSL 54.81□□□□□ -1.649e-8■□□□□ 10.9
LIN28BQ6ZN17 FN1-216ENST00000469569 629 ntTSL 210.09□□□□□ -0.792e-60■□□□□ 10.9
LIN28BQ6ZN17 C2-217ENST00000497706 1609 ntTSL 516.99■□□□□ 0.312e-6■□□□□ 10.9
LIN28BQ6ZN17 C2-202ENST00000383177 1847 ntTSL 514.73□□□□□ -0.052e-6■□□□□ 10.9
LIN28BQ6ZN17 C2-211ENST00000469372 1906 ntTSL 2 BASIC13.58□□□□□ -0.242e-6■□□□□ 10.9
LIN28BQ6ZN17 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.24□□□□□ -0.292e-6■□□□□ 10.9
LIN28BQ6ZN17 C2-206ENST00000442278 2434 ntTSL 2 BASIC11.94□□□□□ -0.52e-6■□□□□ 10.9
LIN28BQ6ZN17 C2-212ENST00000482060 2335 ntTSL 211.38□□□□□ -0.592e-6■□□□□ 10.9
LIN28BQ6ZN17 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.052e-6■□□□□ 10.9
LIN28BQ6ZN17 NANS-206ENST00000495319 764 ntTSL 320.25■□□□□ 0.833e-8■□□□□ 10.9
LIN28BQ6ZN17 NANS-205ENST00000480925 649 ntTSL 217.58■□□□□ 0.43e-8■□□□□ 10.9
LIN28BQ6ZN17 NARF-211ENST00000578820 625 ntTSL 312.56□□□□□ -0.42e-8■□□□□ 10.9
LIN28BQ6ZN17 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC14.6□□□□□ -0.072e-6■□□□□ 10.9
LIN28BQ6ZN17 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.142e-6■□□□□ 10.9
LIN28BQ6ZN17 ZCCHC7-203ENST00000461038 2793 ntTSL 1 (best)14.11□□□□□ -0.152e-6■□□□□ 10.9
LIN28BQ6ZN17 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.782e-6■□□□□ 10.9
LIN28BQ6ZN17 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.99■□□□□ 0.791e-6■□□□□ 10.9
LIN28BQ6ZN17 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.58■□□□□ 0.721e-6■□□□□ 10.9
LIN28BQ6ZN17 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.11e-6■□□□□ 10.9
LIN28BQ6ZN17 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC13.92□□□□□ -0.181e-6■□□□□ 10.9
LIN28BQ6ZN17 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC12.77□□□□□ -0.361e-6■□□□□ 10.9
LIN28BQ6ZN17 PSMD4-205ENST00000445776 703 ntTSL 319.9■□□□□ 0.782e-7■□□□□ 10.9
LIN28BQ6ZN17 PSMD4-203ENST00000427779 649 ntTSL 319.68■□□□□ 0.742e-7■□□□□ 10.9
LIN28BQ6ZN17 PSMD4-212ENST00000491857 461 ntTSL 219.68■□□□□ 0.742e-7■□□□□ 10.9
LIN28BQ6ZN17 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.59■□□□□ 0.572e-7■□□□□ 10.9
LIN28BQ6ZN17 PSMD4-211ENST00000476855 1232 ntTSL 217.15■□□□□ 0.342e-7■□□□□ 10.9
LIN28BQ6ZN17 PSMD4-202ENST00000368884 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.262e-7■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-201ENST00000352800 611 ntTSL 523.55■■□□□ 1.368e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-209ENST00000431421 550 ntTSL 420.54■□□□□ 0.888e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-217ENST00000626672 568 ntTSL 419.29■□□□□ 0.688e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-210ENST00000431674 559 ntTSL 417.65■□□□□ 0.428e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-213ENST00000450267 588 ntTSL 317.05■□□□□ 0.328e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-207ENST00000428970 575 ntTSL 412.46□□□□□ -0.418e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-214ENST00000457928 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.618e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-211ENST00000437738 565 ntTSL 58.45□□□□□ -1.068e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-220ENST00000630796 656 ntTSL 57.97□□□□□ -1.138e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-205ENST00000424913 592 ntTSL 47.72□□□□□ -1.178e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-221ENST00000630833 567 ntTSL 45.73□□□□□ -1.498e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-224ENST00000635794 768 ntTSL 55.03□□□□□ -1.68e-10■□□□□ 10.9
LIN28BQ6ZN17 TBL1XR1-222ENST00000631253 4186 ntTSL 52.02□□□□□ -2.098e-10■□□□□ 10.9
LIN28BQ6ZN17 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.186e-7■□□□□ 10.8
LIN28BQ6ZN17 RPS27A-206ENST00000468810 597 ntTSL 310.75□□□□□ -0.692e-17■□□□□ 10.8
LIN28BQ6ZN17 EIF4B-206ENST00000549592 1901 ntTSL 211.62□□□□□ -0.551e-10■□□□□ 10.8
LIN28BQ6ZN17 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.54■□□□□ 0.725e-7■□□□□ 10.8
LIN28BQ6ZN17 G3BP1-212ENST00000522761 1763 ntTSL 218.62■□□□□ 0.572e-6■□□□□ 10.8
LIN28BQ6ZN17 G3BP1-208ENST00000520177 2700 ntTSL 1 (best)13.88□□□□□ -0.192e-6■□□□□ 10.8
LIN28BQ6ZN17 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.522e-6■□□□□ 10.8
LIN28BQ6ZN17 RPS29-208ENST00000557519 333 ntTSL 310.88□□□□□ -0.672e-31■□□□□ 10.8
LIN28BQ6ZN17 DLD-202ENST00000415325 1802 ntTSL 213.41□□□□□ -0.266e-8■□□□□ 10.8
LIN28BQ6ZN17 DLD-201ENST00000205402 3755 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.776e-8■□□□□ 10.8
LIN28BQ6ZN17 DLD-205ENST00000440410 1993 ntTSL 2 BASIC10.06□□□□□ -0.86e-8■□□□□ 10.8
LIN28BQ6ZN17 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.75□□□□□ -1.816e-8■□□□□ 10.8
LIN28BQ6ZN17 DLD-203ENST00000417551 2041 ntTSL 53.73□□□□□ -1.816e-8■□□□□ 10.8
LIN28BQ6ZN17 P4HB-217ENST00000573778 688 ntTSL 522.07■■□□□ 1.123e-44■□□□□ 10.8
LIN28BQ6ZN17 P4HB-221ENST00000576052 562 ntTSL 421.82■■□□□ 1.083e-44■□□□□ 10.8
LIN28BQ6ZN17 P4HB-218ENST00000574007 1053 ntTSL 215.85■□□□□ 0.133e-44■□□□□ 10.8
LIN28BQ6ZN17 P4HB-214ENST00000570907 353 ntTSL 36.19□□□□□ -1.423e-44■□□□□ 10.8
LIN28BQ6ZN17 EEF1B2-204ENST00000415904 649 ntTSL 312.82□□□□□ -0.362e-10■□□□□ 10.8
LIN28BQ6ZN17 EEF1B2-206ENST00000435123 389 ntTSL 59.61□□□□□ -0.872e-10■□□□□ 10.8
LIN28BQ6ZN17 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.72e-10■□□□□ 10.8
LIN28BQ6ZN17 EIF2S1-203ENST00000554332 534 ntTSL 23.46□□□□□ -1.862e-10■□□□□ 10.8
LIN28BQ6ZN17 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.172e-10■□□□□ 10.8
Retrieved 100 of 21,972 protein–RNA pairs in 442.8 ms