RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	CHIC1	Q5VXU3	224 aa		4.39	□□□□□ -1.71
MECP2-222	ENST00000637533	AEBP2	Q6ZN18	517 aa	Predicted RBP	4	□□□□□ -1.77
MECP2-222	ENST00000637533	PLPPR3	Q6T4P5	718 aa		3.82	□□□□□ -1.8
MECP2-222	ENST00000637533	PHF23	Q9BUL5	403 aa	Predicted RBP	3.69	□□□□□ -1.82
MECP2-222	ENST00000637533	SENP3	Q9H4L4	574 aa	Predicted RBP	3.69	□□□□□ -1.82
MECP2-222	ENST00000637533	EHMT2	Q96KQ7	1210 aa		3.53	□□□□□ -1.84
MECP2-222	ENST00000637533	NCBP3	Q53F19	620 aa	Known RBP	3.51	□□□□□ -1.85
MECP2-222	ENST00000637533	SLC24A1	O60721	1099 aa		3.5	□□□□□ -1.85
MECP2-222	ENST00000637533	AMER1	Q5JTC6	1135 aa	Predicted RBP	3.47	□□□□□ -1.85
MECP2-222	ENST00000637533	SLC4A1AP	Q9BWU0	796 aa	Known RBP	3.44	□□□□□ -1.86
MECP2-222	ENST00000637533	KCNA4	P22459	653 aa		3.4	□□□□□ -1.87
MECP2-222	ENST00000637533	SCAF1	Q9H7N4	1312 aa	Known RBP	3.35	□□□□□ -1.87
MECP2-222	ENST00000637533	CSRNP3	Q8WYN3	585 aa		3.33	□□□□□ -1.88
MECP2-222	ENST00000637533	ERICH6	Q7L0X2	663 aa		3.29	□□□□□ -1.88
MECP2-222	ENST00000637533	PPP4R3CP	Q6ZMV5	832 aa		3.28	□□□□□ -1.88
MECP2-222	ENST00000637533	CNKSR2	Q8WXI2	1034 aa		3.24	□□□□□ -1.89
MECP2-222	ENST00000637533	FOXD4L1	Q9NU39	408 aa		3.23	□□□□□ -1.89
MECP2-222	ENST00000637533	DNAJC5B	Q9UF47	199 aa		3.23	□□□□□ -1.89
MECP2-222	ENST00000637533	ADRA2B	P18089	450 aa		3.22	□□□□□ -1.89
MECP2-222	ENST00000637533	ATXN8OS	P0DMR3	200 aa		3.21	□□□□□ -1.9
MECP2-222	ENST00000637533	RTN4	Q9NQC3	1192 aa	Known RBP	3.19	□□□□□ -1.9
MECP2-222	ENST00000637533	NPM3	O75607	178 aa	Known RBP	3.17	□□□□□ -1.9
MECP2-222	ENST00000637533	BCAN	Q96GW7	911 aa		3.17	□□□□□ -1.9
MECP2-222	ENST00000637533	FOXD1	Q16676	465 aa		3.16	□□□□□ -1.9
MECP2-222	ENST00000637533	PIAS4	Q8N2W9	510 aa	Predicted RBP	3.16	□□□□□ -1.9
MECP2-222	ENST00000637533	FBXO3	Q9UK99	471 aa		3.16	□□□□□ -1.9
MECP2-222	ENST00000637533	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	3.13	□□□□□ -1.91
MECP2-222	ENST00000637533	HNRNPUL2	Q1KMD3	747 aa	Known RBP	3.13	□□□□□ -1.91
MECP2-222	ENST00000637533	PPP6R1	Q9UPN7	881 aa		3.13	□□□□□ -1.91
MECP2-222	ENST00000637533	APLP2	Q06481	763 aa		3.12	□□□□□ -1.91
MECP2-222	ENST00000637533	MSH5	O43196	834 aa		3.09	□□□□□ -1.91
MECP2-222	ENST00000637533	MYCN	P04198	464 aa	Predicted RBP	3.09	□□□□□ -1.91
MECP2-222	ENST00000637533	FKBP8	Q14318	412 aa		3.09	□□□□□ -1.91
MECP2-222	ENST00000637533	RNF216	Q9NWF9	866 aa	Predicted RBP	3.09	□□□□□ -1.91
MECP2-222	ENST00000637533	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	3.09	□□□□□ -1.91
MECP2-222	ENST00000637533	VSIG10	Q8N0Z9	540 aa		3.08	□□□□□ -1.92
MECP2-222	ENST00000637533	PLCB2	Q00722	1185 aa		3.07	□□□□□ -1.92
MECP2-222	ENST00000637533	SAMD1	Q6SPF0	538 aa	Predicted RBP	3.04	□□□□□ -1.92
MECP2-222	ENST00000637533	ARX	Q96QS3	562 aa		3.04	□□□□□ -1.92
MECP2-222	ENST00000637533	HAP1	P54257	671 aa	Predicted RBP	3.02	□□□□□ -1.93
MECP2-222	ENST00000637533	DAXX	Q9UER7	740 aa	Predicted RBP	3.02	□□□□□ -1.93
MECP2-222	ENST00000637533	ZBTB22	O15209	634 aa		3.01	□□□□□ -1.93
MECP2-222	ENST00000637533	DCAF8L2	P0C7V8	631 aa		3	□□□□□ -1.93
MECP2-222	ENST00000637533	TAOK2	Q9UL54	1235 aa		3	□□□□□ -1.93
MECP2-222	ENST00000637533	RANGAP1	P46060	587 aa	Predicted RBP	2.99	□□□□□ -1.93
MECP2-222	ENST00000637533	NBR1	Q14596	966 aa		2.99	□□□□□ -1.93
MECP2-222	ENST00000637533	PLEKHG5	O94827	1062 aa		2.97	□□□□□ -1.93
MECP2-222	ENST00000637533	BBX	Q8WY36	941 aa	Predicted RBP	2.96	□□□□□ -1.94
MECP2-222	ENST00000637533	TULP1	O00294	542 aa	Predicted RBP	2.95	□□□□□ -1.94
MECP2-222	ENST00000637533	HOXD11	P31277	338 aa	Predicted RBP	2.95	□□□□□ -1.94
MECP2-222	ENST00000637533	HOMEZ	Q8IX15	550 aa		2.95	□□□□□ -1.94
MECP2-222	ENST00000637533	TRIM41	Q8WV44	630 aa		2.95	□□□□□ -1.94
MECP2-222	ENST00000637533	RYDEN	Q9NUL5	291 aa	Known RBP	2.95	□□□□□ -1.94
MECP2-222	ENST00000637533	ZBTB47	Q9UFB7	747 aa	Predicted RBP	2.95	□□□□□ -1.94
MECP2-222	ENST00000637533	FBLN2	P98095	1184 aa		2.94	□□□□□ -1.94
MECP2-222	ENST00000637533	SPRYD3	Q8NCJ5	442 aa		2.92	□□□□□ -1.94
MECP2-222	ENST00000637533	ZBTB12	Q9Y330	459 aa	Predicted RBP	2.92	□□□□□ -1.94
MECP2-222	ENST00000637533	VASP	P50552	380 aa	Predicted RBP	2.91	□□□□□ -1.94
MECP2-222	ENST00000637533	TPRN	Q4KMQ1	711 aa		2.91	□□□□□ -1.94
MECP2-222	ENST00000637533	STAG3	Q9UJ98	1225 aa		2.91	□□□□□ -1.94
MECP2-222	ENST00000637533	TMEM132A	Q24JP5	1023 aa		2.9	□□□□□ -1.95
MECP2-222	ENST00000637533	DMRT2	Q9Y5R5	561 aa		2.9	□□□□□ -1.95
MECP2-222	ENST00000637533	SPDYE4	A6NLX3	237 aa		2.89	□□□□□ -1.95
MECP2-222	ENST00000637533	P3H3	Q8IVL6	736 aa		2.88	□□□□□ -1.95
MECP2-222	ENST00000637533	KLHL34	Q8N239	644 aa		2.88	□□□□□ -1.95
MECP2-222	ENST00000637533	SPOCK2	Q92563	424 aa		2.88	□□□□□ -1.95
MECP2-222	ENST00000637533	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	2.88	□□□□□ -1.95
MECP2-222	ENST00000637533	GTF3C3	Q9Y5Q9	886 aa		2.87	□□□□□ -1.95
MECP2-222	ENST00000637533	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	2.86	□□□□□ -1.95
MECP2-222	ENST00000637533	ECM2	O94769	699 aa	Predicted RBP	2.85	□□□□□ -1.95
MECP2-222	ENST00000637533	SLC4A2	P04920	1241 aa		2.85	□□□□□ -1.95
MECP2-222	ENST00000637533	C14orf37	Q86TY3	774 aa		2.85	□□□□□ -1.95
MECP2-222	ENST00000637533	CFAP44	Q96MT7	982 aa		2.85	□□□□□ -1.95
MECP2-222	ENST00000637533	ZNF219	Q9P2Y4	722 aa	Predicted RBP	2.84	□□□□□ -1.95
MECP2-222	ENST00000637533	PROM2	Q8N271	834 aa		2.82	□□□□□ -1.96
MECP2-222	ENST00000637533	PLCD3	Q8N3E9	789 aa		2.82	□□□□□ -1.96
MECP2-222	ENST00000637533	GSE1	Q14687	1217 aa		2.8	□□□□□ -1.96
MECP2-222	ENST00000637533	MYT1	Q01538	1121 aa		2.79	□□□□□ -1.96
MECP2-222	ENST00000637533	SMYD5	Q6GMV2	418 aa		2.79	□□□□□ -1.96
MECP2-222	ENST00000637533	WDR70	Q9NW82	654 aa		2.79	□□□□□ -1.96
MECP2-222	ENST00000637533	DCAF8L1	A6NGE4	600 aa		2.78	□□□□□ -1.96
MECP2-222	ENST00000637533	PRKCSH	P14314	528 aa	Predicted RBP	2.78	□□□□□ -1.96
MECP2-222	ENST00000637533	DNAJC5	Q9H3Z4	198 aa		2.78	□□□□□ -1.96
MECP2-222	ENST00000637533	MAPK8IP2	Q13387	824 aa	Predicted RBP	2.77	□□□□□ -1.97
MECP2-222	ENST00000637533	PKD2	Q13563	968 aa		2.77	□□□□□ -1.97
MECP2-222	ENST00000637533	IFNLR1	Q8IU57	520 aa	Predicted RBP	2.77	□□□□□ -1.97
MECP2-222	ENST00000637533	HS6ST3	Q8IZP7	471 aa		2.77	□□□□□ -1.97
MECP2-222	ENST00000637533	CHGA	P10645	457 aa	Known RBP	2.76	□□□□□ -1.97
MECP2-222	ENST00000637533	PDE4C	Q08493	712 aa		2.76	□□□□□ -1.97
MECP2-222	ENST00000637533	HMGB1	P09429	215 aa	Known RBP	2.75	□□□□□ -1.97
MECP2-222	ENST00000637533	TIMELESS	Q9UNS1	1208 aa		2.75	□□□□□ -1.97
MECP2-222	ENST00000637533	ZBTB7C	A1YPR0	619 aa		2.74	□□□□□ -1.97
MECP2-222	ENST00000637533	SPDYE2B	A6NHP3	402 aa		2.74	□□□□□ -1.97
MECP2-222	ENST00000637533	SPDYE6	P0CI01	402 aa		2.74	□□□□□ -1.97
MECP2-222	ENST00000637533	SPDYE2	Q495Y8	402 aa		2.74	□□□□□ -1.97
MECP2-222	ENST00000637533	MIER1	Q8N108	512 aa		2.74	□□□□□ -1.97
MECP2-222	ENST00000637533	CIZ1	Q9ULV3	898 aa	Predicted RBP	2.74	□□□□□ -1.97
MECP2-222	ENST00000637533	PATL2	C9JE40	543 aa	Known RBP	2.73	□□□□□ -1.97
MECP2-222	ENST00000637533	KDM2A	Q9Y2K7	1162 aa		2.73	□□□□□ -1.97
MECP2-222	ENST00000637533	CCDC9	Q9Y3X0	531 aa	Known RBP	2.73	□□□□□ -1.97

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