RNA–Protein interactions for RNA: ENST00000468810.1

RPS27A-206, Transcript of ribosomal protein S27a, humanhuman

TSL 3

Gene RPS27A, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-206ENST00000468810 AEBP2Q6ZN18 517 aaPredicted RBP28.57■■■□□ 2.16
RPS27A-206ENST00000468810 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
RPS27A-206ENST00000468810 SENP3Q9H4L4 574 aaPredicted RBP24.28■■□□□ 1.48
RPS27A-206ENST00000468810 PHF23Q9BUL5 403 aaPredicted RBP23.95■■□□□ 1.42
RPS27A-206ENST00000468810 NISCHQ9Y2I1 1504 aa23.39■■□□□ 1.34
RPS27A-206ENST00000468810 FOXD1Q16676 465 aa22.76■■□□□ 1.23
RPS27A-206ENST00000468810 POTEDQ86YR6 584 aa21.56■■□□□ 1.04
RPS27A-206ENST00000468810 MSH5O43196 834 aa21.34■■□□□ 1.01
RPS27A-206ENST00000468810 PIAS4Q8N2W9 510 aaPredicted RBP21.1■□□□□ 0.97
RPS27A-206ENST00000468810 PLPPR3Q6T4P5 718 aa21.09■□□□□ 0.97
RPS27A-206ENST00000468810 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
RPS27A-206ENST00000468810 CCDC180Q9P1Z9 1646 aa20.91■□□□□ 0.94
RPS27A-206ENST00000468810 ADRA2BP18089 450 aa20.89■□□□□ 0.93
RPS27A-206ENST00000468810 ABCC9O60706 1549 aa20.78■□□□□ 0.92
RPS27A-206ENST00000468810 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
RPS27A-206ENST00000468810 NACADO15069 1562 aa19.7■□□□□ 0.74
RPS27A-206ENST00000468810 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
RPS27A-206ENST00000468810 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
RPS27A-206ENST00000468810 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
RPS27A-206ENST00000468810 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
RPS27A-206ENST00000468810 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
RPS27A-206ENST00000468810 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
RPS27A-206ENST00000468810 MAPK8IP2Q13387 824 aaPredicted RBP19.32■□□□□ 0.68
RPS27A-206ENST00000468810 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
RPS27A-206ENST00000468810 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
RPS27A-206ENST00000468810 DMRT2Q9Y5R5 561 aa19.25■□□□□ 0.67
RPS27A-206ENST00000468810 SCRIBQ14160 1630 aa19.11■□□□□ 0.65
RPS27A-206ENST00000468810 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
RPS27A-206ENST00000468810 SHROOM4Q9ULL8 1493 aa18.91■□□□□ 0.62
RPS27A-206ENST00000468810 CC2D2AQ9P2K1 1620 aa18.79■□□□□ 0.6
RPS27A-206ENST00000468810 EIF4G1Q04637 1599 aaKnown RBP18.77■□□□□ 0.6
RPS27A-206ENST00000468810 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
RPS27A-206ENST00000468810 CACNB1Q02641 598 aaPredicted RBP18.51■□□□□ 0.55
RPS27A-206ENST00000468810 PPP4R3CPQ6ZMV5 832 aa18.46■□□□□ 0.55
RPS27A-206ENST00000468810 HOXD11P31277 338 aaPredicted RBP18.41■□□□□ 0.54
RPS27A-206ENST00000468810 DCAF8L1A6NGE4 600 aa18.34■□□□□ 0.53
RPS27A-206ENST00000468810 RNF39Q9H2S5 420 aa18.26■□□□□ 0.51
RPS27A-206ENST00000468810 SMARCA4P51532 1647 aa18.23■□□□□ 0.51
RPS27A-206ENST00000468810 NCAPD3P42695 1498 aa18.2■□□□□ 0.5
RPS27A-206ENST00000468810 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
RPS27A-206ENST00000468810 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
RPS27A-206ENST00000468810 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
RPS27A-206ENST00000468810 BAZ1AQ9NRL2 1556 aaPredicted RBP18.12■□□□□ 0.49
RPS27A-206ENST00000468810 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
RPS27A-206ENST00000468810 MROH2BQ7Z745 1585 aa18.07■□□□□ 0.48
RPS27A-206ENST00000468810 HMGXB3Q12766 1538 aa18.07■□□□□ 0.48
RPS27A-206ENST00000468810 PEG3Q9GZU2 1588 aa18.02■□□□□ 0.48
RPS27A-206ENST00000468810 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
RPS27A-206ENST00000468810 NESP48681 1621 aa17.94■□□□□ 0.46
RPS27A-206ENST00000468810 C1QBPQ07021 282 aaKnown RBP17.9■□□□□ 0.46
RPS27A-206ENST00000468810 WIZO95785 1651 aa17.89■□□□□ 0.45
RPS27A-206ENST00000468810 ERCC6Q03468 1493 aa17.87■□□□□ 0.45
RPS27A-206ENST00000468810 CUX2O14529 1486 aa17.77■□□□□ 0.44
RPS27A-206ENST00000468810 LAMC3Q9Y6N6 1575 aa17.75■□□□□ 0.43
RPS27A-206ENST00000468810 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
RPS27A-206ENST00000468810 KIF21AQ7Z4S6 1674 aa17.72■□□□□ 0.43
RPS27A-206ENST00000468810 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
RPS27A-206ENST00000468810 CADPSQ9ULU8 1353 aa17.65■□□□□ 0.42
RPS27A-206ENST00000468810 PDS5BQ9NTI5 1447 aa17.62■□□□□ 0.41
RPS27A-206ENST00000468810 DNAJC5Q9H3Z4 198 aa17.61■□□□□ 0.41
RPS27A-206ENST00000468810 TOP2AP11388 1531 aaKnown RBP17.61■□□□□ 0.41
RPS27A-206ENST00000468810 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
RPS27A-206ENST00000468810 CFTRP13569 1480 aa17.49■□□□□ 0.39
RPS27A-206ENST00000468810 MRC2Q9UBG0 1479 aa17.49■□□□□ 0.39
RPS27A-206ENST00000468810 FANCD2Q9BXW9 1451 aa17.46■□□□□ 0.39
RPS27A-206ENST00000468810 WDR62O43379 1518 aa17.46■□□□□ 0.39
RPS27A-206ENST00000468810 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
RPS27A-206ENST00000468810 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
RPS27A-206ENST00000468810 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
RPS27A-206ENST00000468810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.384e-7■□□□□ 9.1
RPS27A-206ENST00000468810 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
RPS27A-206ENST00000468810 URB2Q14146 1524 aaKnown RBP17.35■□□□□ 0.37
RPS27A-206ENST00000468810 TOPBP1Q92547 1522 aa17.17■□□□□ 0.34
RPS27A-206ENST00000468810 U3KPZ7 1027 aaPredicted RBP17.14■□□□□ 0.33
RPS27A-206ENST00000468810 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
RPS27A-206ENST00000468810 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
RPS27A-206ENST00000468810 IFT140Q96RY7 1462 aa17.09■□□□□ 0.33
RPS27A-206ENST00000468810 SUPT5HO00267 1087 aaKnown RBP17.07■□□□□ 0.32
RPS27A-206ENST00000468810 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
RPS27A-206ENST00000468810 TARBP1Q13395 1621 aaKnown RBP17.03■□□□□ 0.32
RPS27A-206ENST00000468810 EIF4G3O43432 1585 aaKnown RBP17.01■□□□□ 0.31
RPS27A-206ENST00000468810 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
RPS27A-206ENST00000468810 POLA1P09884 1462 aaPredicted RBP16.99■□□□□ 0.31
RPS27A-206ENST00000468810 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
RPS27A-206ENST00000468810 DSG3P32926 999 aa16.97■□□□□ 0.31
RPS27A-206ENST00000468810 AQRO60306 1485 aaKnown RBP eCLIP16.97■□□□□ 0.314e-8■■■■■ 60.3
RPS27A-206ENST00000468810 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
RPS27A-206ENST00000468810 CUX1P39880 1505 aa16.96■□□□□ 0.3
RPS27A-206ENST00000468810 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
RPS27A-206ENST00000468810 FGD5Q6ZNL6 1462 aa16.92■□□□□ 0.3
RPS27A-206ENST00000468810 CHD1O14646 1710 aa16.9■□□□□ 0.3
RPS27A-206ENST00000468810 SOGA1O94964 1423 aa16.9■□□□□ 0.3
RPS27A-206ENST00000468810 CAPN15O75808 1086 aa16.88■□□□□ 0.29
RPS27A-206ENST00000468810 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
RPS27A-206ENST00000468810 WDR97A6NE52 1622 aa16.83■□□□□ 0.28
RPS27A-206ENST00000468810 RIMBP3CA6NJZ7 1639 aa16.83■□□□□ 0.28
RPS27A-206ENST00000468810 RIMBP3BA6NNM3 1639 aa16.83■□□□□ 0.28
RPS27A-206ENST00000468810 RIMBP3Q9UFD9 1639 aa16.83■□□□□ 0.28
RPS27A-206ENST00000468810 SLC4A2P04920 1241 aa16.79■□□□□ 0.28
RPS27A-206ENST00000468810 SNAPC4Q5SXM2 1469 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms