RNA–Protein interactions for RNA: ENST00000602866.5

PSMC3-212, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSMC3, Length 1,373 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-212ENST00000602866 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.53
PSMC3-212ENST00000602866 ABCC9O60706 1549 aa33.33■■■□□ 2.93
PSMC3-212ENST00000602866 CCDC180Q9P1Z9 1646 aa33.29■■■□□ 2.92
PSMC3-212ENST00000602866 RB1CC1Q8TDY2 1594 aa31.76■■■□□ 2.67
PSMC3-212ENST00000602866 NACADO15069 1562 aa31.54■■■□□ 2.64
PSMC3-212ENST00000602866 DCAF8L2P0C7V8 631 aa31.38■■■□□ 2.61
PSMC3-212ENST00000602866 DNAJC5BQ9UF47 199 aa31.33■■■□□ 2.61
PSMC3-212ENST00000602866 MYO15BQ96JP2 1530 aa31.12■■■□□ 2.57
PSMC3-212ENST00000602866 PABPN1Q86U42 306 aaKnown RBP eCLIP31.05■■■□□ 2.56
PSMC3-212ENST00000602866 UNC13AQ9UPW8 1703 aa30.9■■■□□ 2.54
PSMC3-212ENST00000602866 BICRAQ9NZM4 1560 aa30.75■■■□□ 2.51
PSMC3-212ENST00000602866 ZCCHC6Q5VYS8 1495 aaKnown RBP30.68■■■□□ 2.5
PSMC3-212ENST00000602866 DCAF1Q9Y4B6 1507 aa30.67■■■□□ 2.5
PSMC3-212ENST00000602866 SHROOM4Q9ULL8 1493 aa30.47■■■□□ 2.47
PSMC3-212ENST00000602866 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
PSMC3-212ENST00000602866 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
PSMC3-212ENST00000602866 CECR2Q9BXF3 1484 aa30.07■■■□□ 2.4
PSMC3-212ENST00000602866 EIF4G1Q04637 1599 aaKnown RBP30.04■■■□□ 2.4
PSMC3-212ENST00000602866 NCAPD3P42695 1498 aa29.14■■■□□ 2.25
PSMC3-212ENST00000602866 ATAD2BQ9ULI0 1458 aa28.98■■■□□ 2.23
PSMC3-212ENST00000602866 DNAJC5Q9H3Z4 198 aa28.94■■■□□ 2.22
PSMC3-212ENST00000602866 SMARCA2P51531 1590 aa28.93■■■□□ 2.22
PSMC3-212ENST00000602866 SMARCA4P51532 1647 aa28.89■■■□□ 2.22
PSMC3-212ENST00000602866 HMGXB3Q12766 1538 aa28.87■■■□□ 2.21
PSMC3-212ENST00000602866 CUX2O14529 1486 aa28.84■■■□□ 2.21
PSMC3-212ENST00000602866 ERCC6Q03468 1493 aa28.84■■■□□ 2.21
PSMC3-212ENST00000602866 BAZ1AQ9NRL2 1556 aaPredicted RBP28.81■■■□□ 2.2
PSMC3-212ENST00000602866 BAZ1BQ9UIG0 1483 aaKnown RBP28.71■■■□□ 2.19
PSMC3-212ENST00000602866 PEG3Q9GZU2 1588 aa28.66■■■□□ 2.18
PSMC3-212ENST00000602866 NESP48681 1621 aa28.58■■■□□ 2.17
PSMC3-212ENST00000602866 MROH2BQ7Z745 1585 aa28.52■■■□□ 2.16
PSMC3-212ENST00000602866 LAMC3Q9Y6N6 1575 aa28.46■■■□□ 2.15
PSMC3-212ENST00000602866 PDS5BQ9NTI5 1447 aa28.36■■■□□ 2.13
PSMC3-212ENST00000602866 THOC2Q8NI27 1593 aaKnown RBP28.3■■■□□ 2.12
PSMC3-212ENST00000602866 CADPSQ9ULU8 1353 aa28.25■■■□□ 2.11
PSMC3-212ENST00000602866 KIF21AQ7Z4S6 1674 aa28.18■■■□□ 2.1
PSMC3-212ENST00000602866 WIZO95785 1651 aa28.14■■■□□ 2.1
PSMC3-212ENST00000602866 MRC2Q9UBG0 1479 aa28.05■■■□□ 2.08
PSMC3-212ENST00000602866 WDR62O43379 1518 aa27.96■■■□□ 2.07
PSMC3-212ENST00000602866 RSF1Q96T23 1441 aaPredicted RBP27.95■■■□□ 2.07
PSMC3-212ENST00000602866 CEP164Q9UPV0 1460 aa27.93■■■□□ 2.06
PSMC3-212ENST00000602866 CFTRP13569 1480 aa27.89■■■□□ 2.05
PSMC3-212ENST00000602866 FANCD2Q9BXW9 1451 aa27.88■■■□□ 2.05
PSMC3-212ENST00000602866 TOP2AP11388 1531 aaKnown RBP27.84■■■□□ 2.05
PSMC3-212ENST00000602866 URB2Q14146 1524 aaKnown RBP27.61■■■□□ 2.01
PSMC3-212ENST00000602866 OSCARQ8IYS5 282 aa27.58■■■□□ 2.01
PSMC3-212ENST00000602866 TRIM41Q8WV44 630 aa27.58■■■□□ 2.01
PSMC3-212ENST00000602866 CCDC88BA6NC98 1476 aa27.53■■■□□ 2
PSMC3-212ENST00000602866 PRDM2Q13029 1718 aa27.52■■■□□ 2
PSMC3-212ENST00000602866 IFT140Q96RY7 1462 aa27.4■■□□□ 1.98
PSMC3-212ENST00000602866 ABCC8Q09428 1581 aa27.38■■□□□ 1.97
PSMC3-212ENST00000602866 TOPBP1Q92547 1522 aa27.33■■□□□ 1.97
PSMC3-212ENST00000602866 ZNF608Q9ULD9 1512 aaPredicted RBP27.27■■□□□ 1.96
PSMC3-212ENST00000602866 DNMBPQ6XZF7 1577 aa27.22■■□□□ 1.95
PSMC3-212ENST00000602866 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
PSMC3-212ENST00000602866 RIMBP3CA6NJZ7 1639 aa27.07■■□□□ 1.92
PSMC3-212ENST00000602866 RIMBP3BA6NNM3 1639 aa27.07■■□□□ 1.92
PSMC3-212ENST00000602866 RIMBP3Q9UFD9 1639 aa27.07■■□□□ 1.92
PSMC3-212ENST00000602866 TARBP1Q13395 1621 aaKnown RBP27.06■■□□□ 1.92
PSMC3-212ENST00000602866 AQRO60306 1485 aaKnown RBP eCLIP27.05■■□□□ 1.921e-6■■■■□ 20.4
PSMC3-212ENST00000602866 POLA1P09884 1462 aaPredicted RBP27.04■■□□□ 1.92
PSMC3-212ENST00000602866 ARHGEF11O15085 1522 aa27.01■■□□□ 1.91
PSMC3-212ENST00000602866 SOGA1O94964 1423 aa26.97■■□□□ 1.91
PSMC3-212ENST00000602866 FBLN2P98095 1184 aa26.96■■□□□ 1.91
PSMC3-212ENST00000602866 RAD54L2Q9Y4B4 1467 aa26.92■■□□□ 1.9
PSMC3-212ENST00000602866 CHD1O14646 1710 aa26.9■■□□□ 1.9
PSMC3-212ENST00000602866 TDRD9Q8NDG6 1382 aaKnown RBP26.9■■□□□ 1.9
PSMC3-212ENST00000602866 CYB5RLQ6IPT4 315 aa26.88■■□□□ 1.89
PSMC3-212ENST00000602866 WDR97A6NE52 1622 aa26.88■■□□□ 1.89
PSMC3-212ENST00000602866 FGD5Q6ZNL6 1462 aa26.85■■□□□ 1.89
PSMC3-212ENST00000602866 CUX1P39880 1505 aa26.8■■□□□ 1.88
PSMC3-212ENST00000602866 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
PSMC3-212ENST00000602866 SNAPC4Q5SXM2 1469 aa26.76■■□□□ 1.87
PSMC3-212ENST00000602866 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
PSMC3-212ENST00000602866 GRIN2BQ13224 1484 aa26.74■■□□□ 1.87
PSMC3-212ENST00000602866 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
PSMC3-212ENST00000602866 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
PSMC3-212ENST00000602866 SUPT5HO00267 1087 aaKnown RBP26.67■■□□□ 1.86
PSMC3-212ENST00000602866 SYNJ2O15056 1496 aa26.65■■□□□ 1.86
PSMC3-212ENST00000602866 CLASP1Q7Z460 1538 aa26.63■■□□□ 1.85
PSMC3-212ENST00000602866 GAPVD1Q14C86 1478 aa26.63■■□□□ 1.85
PSMC3-212ENST00000602866 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
PSMC3-212ENST00000602866 ABCA10Q8WWZ4 1543 aa26.58■■□□□ 1.85
PSMC3-212ENST00000602866 PBRM1Q86U86 1689 aa26.53■■□□□ 1.84
PSMC3-212ENST00000602866 WRNQ14191 1432 aaPredicted RBP eCLIP26.51■■□□□ 1.83
PSMC3-212ENST00000602866 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
PSMC3-212ENST00000602866 TOP2BQ02880 1626 aa26.38■■□□□ 1.81
PSMC3-212ENST00000602866 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
PSMC3-212ENST00000602866 BIVM-ERCC5R4GMW8 1640 aa26.35■■□□□ 1.81
PSMC3-212ENST00000602866 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
PSMC3-212ENST00000602866 NUP160Q12769 1436 aa26.29■■□□□ 1.8
PSMC3-212ENST00000602866 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
PSMC3-212ENST00000602866 ERICH3Q5RHP9 1530 aa26.27■■□□□ 1.8
PSMC3-212ENST00000602866 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
PSMC3-212ENST00000602866 ERCC6L2Q5T890 1561 aa26.15■■□□□ 1.78
PSMC3-212ENST00000602866 SHROOM2Q13796 1616 aa26.14■■□□□ 1.78
PSMC3-212ENST00000602866 JPH4Q96JJ6 628 aa26.09■■□□□ 1.77
PSMC3-212ENST00000602866 PRG4Q92954 1404 aaPredicted RBP26.05■■□□□ 1.76
PSMC3-212ENST00000602866 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
PSMC3-212ENST00000602866 KIF27Q86VH2 1401 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms