RNA–Protein interactions for RNA: ENST00000298852.7

PSMC3-201, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-201ENST00000298852 NISCHQ9Y2I1 1504 aa38.97■■■■□ 3.83
PSMC3-201ENST00000298852 CCDC180Q9P1Z9 1646 aa34.47■■■■□ 3.11
PSMC3-201ENST00000298852 ABCC9O60706 1549 aa32.97■■■□□ 2.87
PSMC3-201ENST00000298852 ZCCHC6Q5VYS8 1495 aaKnown RBP32.6■■■□□ 2.81
PSMC3-201ENST00000298852 DCAF1Q9Y4B6 1507 aa32.37■■■□□ 2.77
PSMC3-201ENST00000298852 MYO15BQ96JP2 1530 aa32.32■■■□□ 2.76
PSMC3-201ENST00000298852 NACADO15069 1562 aa32.24■■■□□ 2.75
PSMC3-201ENST00000298852 DCAF8L2P0C7V8 631 aa32.11■■■□□ 2.73
PSMC3-201ENST00000298852 RB1CC1Q8TDY2 1594 aa32.1■■■□□ 2.73
PSMC3-201ENST00000298852 UNC13AQ9UPW8 1703 aa31.39■■■□□ 2.62
PSMC3-201ENST00000298852 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
PSMC3-201ENST00000298852 BICRAQ9NZM4 1560 aa31.09■■■□□ 2.57
PSMC3-201ENST00000298852 SHROOM4Q9ULL8 1493 aa30.96■■■□□ 2.55
PSMC3-201ENST00000298852 PABPN1Q86U42 306 aaKnown RBP eCLIP30.85■■■□□ 2.53
PSMC3-201ENST00000298852 CECR2Q9BXF3 1484 aa30.22■■■□□ 2.43
PSMC3-201ENST00000298852 EIF4G1Q04637 1599 aaKnown RBP30.21■■■□□ 2.43
PSMC3-201ENST00000298852 BAZ1AQ9NRL2 1556 aaPredicted RBP30.19■■■□□ 2.42
PSMC3-201ENST00000298852 SMARCA4P51532 1647 aa30.12■■■□□ 2.41
PSMC3-201ENST00000298852 MROH2BQ7Z745 1585 aa30■■■□□ 2.39
PSMC3-201ENST00000298852 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
PSMC3-201ENST00000298852 PEG3Q9GZU2 1588 aa29.89■■■□□ 2.38
PSMC3-201ENST00000298852 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
PSMC3-201ENST00000298852 SMARCA2P51531 1590 aa29.83■■■□□ 2.37
PSMC3-201ENST00000298852 ATAD2BQ9ULI0 1458 aa29.78■■■□□ 2.36
PSMC3-201ENST00000298852 NCAPD3P42695 1498 aa29.71■■■□□ 2.35
PSMC3-201ENST00000298852 WIZO95785 1651 aa29.71■■■□□ 2.35
PSMC3-201ENST00000298852 DNAJC5BQ9UF47 199 aa29.67■■■□□ 2.34
PSMC3-201ENST00000298852 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
PSMC3-201ENST00000298852 BAZ1BQ9UIG0 1483 aaKnown RBP29.57■■■□□ 2.32
PSMC3-201ENST00000298852 TOP2AP11388 1531 aaKnown RBP29.48■■■□□ 2.31
PSMC3-201ENST00000298852 SUPT5HO00267 1087 aaKnown RBP29.44■■■□□ 2.3
PSMC3-201ENST00000298852 CCDC88BA6NC98 1476 aa29.08■■■□□ 2.25
PSMC3-201ENST00000298852 LAMC3Q9Y6N6 1575 aa28.86■■■□□ 2.21
PSMC3-201ENST00000298852 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
PSMC3-201ENST00000298852 CFTRP13569 1480 aa28.82■■■□□ 2.2
PSMC3-201ENST00000298852 PRDM2Q13029 1718 aa28.74■■■□□ 2.19
PSMC3-201ENST00000298852 NESP48681 1621 aa28.71■■■□□ 2.19
PSMC3-201ENST00000298852 PDS5BQ9NTI5 1447 aa28.61■■■□□ 2.17
PSMC3-201ENST00000298852 FANCD2Q9BXW9 1451 aa28.5■■■□□ 2.15
PSMC3-201ENST00000298852 KIF21AQ7Z4S6 1674 aa28.46■■■□□ 2.15
PSMC3-201ENST00000298852 CEP164Q9UPV0 1460 aa28.42■■■□□ 2.14
PSMC3-201ENST00000298852 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
PSMC3-201ENST00000298852 MRC2Q9UBG0 1479 aa28.26■■■□□ 2.11
PSMC3-201ENST00000298852 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
PSMC3-201ENST00000298852 ABCC8Q09428 1581 aa28.22■■■□□ 2.11
PSMC3-201ENST00000298852 WDR62O43379 1518 aa28.18■■■□□ 2.1
PSMC3-201ENST00000298852 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
PSMC3-201ENST00000298852 URB2Q14146 1524 aaKnown RBP28.17■■■□□ 2.1
PSMC3-201ENST00000298852 WRNQ14191 1432 aaPredicted RBP eCLIP28.16■■■□□ 2.1
PSMC3-201ENST00000298852 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
PSMC3-201ENST00000298852 CUX1P39880 1505 aa28.12■■■□□ 2.09
PSMC3-201ENST00000298852 TOP2BQ02880 1626 aa28.09■■■□□ 2.09
PSMC3-201ENST00000298852 BIVM-ERCC5R4GMW8 1640 aa28.09■■■□□ 2.09
PSMC3-201ENST00000298852 SYNJ1O43426 1573 aa28.05■■■□□ 2.08
PSMC3-201ENST00000298852 CUX2O14529 1486 aa27.97■■■□□ 2.07
PSMC3-201ENST00000298852 FGD5Q6ZNL6 1462 aa27.93■■■□□ 2.06
PSMC3-201ENST00000298852 POLA1P09884 1462 aaPredicted RBP27.92■■■□□ 2.06
PSMC3-201ENST00000298852 CHIC1Q5VXU3 224 aa27.89■■■□□ 2.06
PSMC3-201ENST00000298852 TRIM41Q8WV44 630 aa27.85■■■□□ 2.05
PSMC3-201ENST00000298852 IFT140Q96RY7 1462 aa27.81■■■□□ 2.04
PSMC3-201ENST00000298852 TARBP1Q13395 1621 aaKnown RBP27.8■■■□□ 2.04
PSMC3-201ENST00000298852 SOGA1O94964 1423 aa27.79■■■□□ 2.04
PSMC3-201ENST00000298852 ABCA10Q8WWZ4 1543 aa27.74■■■□□ 2.03
PSMC3-201ENST00000298852 WDR97A6NE52 1622 aa27.74■■■□□ 2.03
PSMC3-201ENST00000298852 RAD54L2Q9Y4B4 1467 aa27.73■■■□□ 2.03
PSMC3-201ENST00000298852 ABCA5Q8WWZ7 1642 aa27.58■■■□□ 2.01
PSMC3-201ENST00000298852 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
PSMC3-201ENST00000298852 EIF4G3O43432 1585 aaKnown RBP27.55■■■□□ 2
PSMC3-201ENST00000298852 KIF27Q86VH2 1401 aa27.54■■■□□ 2
PSMC3-201ENST00000298852 TDRD9Q8NDG6 1382 aaKnown RBP27.52■■■□□ 2
PSMC3-201ENST00000298852 GAPVD1Q14C86 1478 aa27.51■■□□□ 1.99
PSMC3-201ENST00000298852 AQRO60306 1485 aaKnown RBP eCLIP27.48■■□□□ 1.991e-6■■■■□ 20.4
PSMC3-201ENST00000298852 EEA1Q15075 1411 aa27.48■■□□□ 1.99
PSMC3-201ENST00000298852 PBRM1Q86U86 1689 aa27.44■■□□□ 1.98
PSMC3-201ENST00000298852 ERICH3Q5RHP9 1530 aa27.44■■□□□ 1.98
PSMC3-201ENST00000298852 GRIN2BQ13224 1484 aa27.43■■□□□ 1.98
PSMC3-201ENST00000298852 RUSC2Q8N2Y8 1516 aa27.39■■□□□ 1.97
PSMC3-201ENST00000298852 IGF1RP08069 1367 aa27.34■■□□□ 1.97
PSMC3-201ENST00000298852 MAGI1Q96QZ7 1491 aaPredicted RBP27.33■■□□□ 1.97
PSMC3-201ENST00000298852 CUL7Q14999 1698 aa27.31■■□□□ 1.96
PSMC3-201ENST00000298852 SNAPC4Q5SXM2 1469 aa27.27■■□□□ 1.96
PSMC3-201ENST00000298852 ADAMTS12P58397 1594 aa27.26■■□□□ 1.95
PSMC3-201ENST00000298852 CSRNP3Q8WYN3 585 aa27.24■■□□□ 1.95
PSMC3-201ENST00000298852 FHAD1B1AJZ9 1412 aa27.22■■□□□ 1.95
PSMC3-201ENST00000298852 SYNJ2O15056 1496 aa27.2■■□□□ 1.94
PSMC3-201ENST00000298852 PRXQ9BXM0 1461 aa27.18■■□□□ 1.94
PSMC3-201ENST00000298852 CARMIL1Q5VZK9 1371 aa27.17■■□□□ 1.94
PSMC3-201ENST00000298852 FAM9AQ8IZU1 332 aaPredicted RBP27.15■■□□□ 1.94
PSMC3-201ENST00000298852 KIF21BO75037 1637 aa27.13■■□□□ 1.93
PSMC3-201ENST00000298852 RAPGEF2Q9Y4G8 1499 aa27.12■■□□□ 1.93
PSMC3-201ENST00000298852 CHD1O14646 1710 aa27.09■■□□□ 1.93
PSMC3-201ENST00000298852 GRIN2AQ12879 1464 aa27.08■■□□□ 1.93
PSMC3-201ENST00000298852 CHMP7Q8WUX9 453 aaPredicted RBP27.06■■□□□ 1.92
PSMC3-201ENST00000298852 FBLN2P98095 1184 aa26.97■■□□□ 1.91
PSMC3-201ENST00000298852 GOLGA3Q08378 1498 aa26.97■■□□□ 1.91
PSMC3-201ENST00000298852 NUP160Q12769 1436 aa26.95■■□□□ 1.91
PSMC3-201ENST00000298852 CEP170Q5SW79 1584 aa26.9■■□□□ 1.9
PSMC3-201ENST00000298852 CTTNBP2Q8WZ74 1663 aa26.88■■□□□ 1.89
PSMC3-201ENST00000298852 OSCARQ8IYS5 282 aa26.85■■□□□ 1.89
PSMC3-201ENST00000298852 KIAA0586Q9BVV6 1533 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms