RNA–Protein interactions for RNA: ENST00000557519.1

RPS29-208, Transcript of ribosomal protein S29, humanhuman

TSL 3

Gene RPS29, Length 333 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-208ENST00000557519 NISCHQ9Y2I1 1504 aa23.63■■□□□ 1.37
RPS29-208ENST00000557519 CCDC180Q9P1Z9 1646 aa21.14■□□□□ 0.97
RPS29-208ENST00000557519 ABCC9O60706 1549 aa20.63■□□□□ 0.89
RPS29-208ENST00000557519 RB1CC1Q8TDY2 1594 aa19.93■□□□□ 0.78
RPS29-208ENST00000557519 NACADO15069 1562 aa19.87■□□□□ 0.77
RPS29-208ENST00000557519 DCAF8L2P0C7V8 631 aa19.77■□□□□ 0.76
RPS29-208ENST00000557519 MYO15BQ96JP2 1530 aa19.73■□□□□ 0.75
RPS29-208ENST00000557519 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
RPS29-208ENST00000557519 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
RPS29-208ENST00000557519 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
RPS29-208ENST00000557519 PABPN1Q86U42 306 aaKnown RBP eCLIP19.22■□□□□ 0.67
RPS29-208ENST00000557519 SCRIBQ14160 1630 aa19.21■□□□□ 0.67
RPS29-208ENST00000557519 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
RPS29-208ENST00000557519 SHROOM4Q9ULL8 1493 aa19.17■□□□□ 0.66
RPS29-208ENST00000557519 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
RPS29-208ENST00000557519 EIF4G1Q04637 1599 aaKnown RBP18.76■□□□□ 0.59
RPS29-208ENST00000557519 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
RPS29-208ENST00000557519 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
RPS29-208ENST00000557519 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
RPS29-208ENST00000557519 SMARCA4P51532 1647 aa18.38■□□□□ 0.53
RPS29-208ENST00000557519 SMARCA2P51531 1590 aa18.33■□□□□ 0.52
RPS29-208ENST00000557519 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
RPS29-208ENST00000557519 ATAD2BQ9ULI0 1458 aa18.26■□□□□ 0.51
RPS29-208ENST00000557519 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
RPS29-208ENST00000557519 PEG3Q9GZU2 1588 aa18.2■□□□□ 0.5
RPS29-208ENST00000557519 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
RPS29-208ENST00000557519 MROH2BQ7Z745 1585 aa18.16■□□□□ 0.5
RPS29-208ENST00000557519 WIZO95785 1651 aa17.98■□□□□ 0.47
RPS29-208ENST00000557519 RSF1Q96T23 1441 aaPredicted RBP17.93■□□□□ 0.46
RPS29-208ENST00000557519 ERCC6Q03468 1493 aa17.9■□□□□ 0.46
RPS29-208ENST00000557519 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
RPS29-208ENST00000557519 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
RPS29-208ENST00000557519 NESP48681 1621 aa17.79■□□□□ 0.44
RPS29-208ENST00000557519 PDS5BQ9NTI5 1447 aa17.76■□□□□ 0.43
RPS29-208ENST00000557519 CADPSQ9ULU8 1353 aa17.75■□□□□ 0.43
RPS29-208ENST00000557519 CUX2O14529 1486 aa17.73■□□□□ 0.43
RPS29-208ENST00000557519 KIF21AQ7Z4S6 1674 aa17.66■□□□□ 0.42
RPS29-208ENST00000557519 CFTRP13569 1480 aa17.62■□□□□ 0.41
RPS29-208ENST00000557519 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
RPS29-208ENST00000557519 PRDM2Q13029 1718 aa17.58■□□□□ 0.41
RPS29-208ENST00000557519 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
RPS29-208ENST00000557519 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
RPS29-208ENST00000557519 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
RPS29-208ENST00000557519 FANCD2Q9BXW9 1451 aa17.55■□□□□ 0.4
RPS29-208ENST00000557519 WDR62O43379 1518 aa17.48■□□□□ 0.39
RPS29-208ENST00000557519 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
RPS29-208ENST00000557519 ABCC8Q09428 1581 aa17.35■□□□□ 0.37
RPS29-208ENST00000557519 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.37
RPS29-208ENST00000557519 DNMBPQ6XZF7 1577 aa17.27■□□□□ 0.35
RPS29-208ENST00000557519 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
RPS29-208ENST00000557519 IFT140Q96RY7 1462 aa17.21■□□□□ 0.35
RPS29-208ENST00000557519 DNAJC5Q9H3Z4 198 aa17.17■□□□□ 0.34
RPS29-208ENST00000557519 POLA1P09884 1462 aaPredicted RBP17.09■□□□□ 0.33
RPS29-208ENST00000557519 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
RPS29-208ENST00000557519 CUX1P39880 1505 aa17.06■□□□□ 0.32
RPS29-208ENST00000557519 WDR97A6NE52 1622 aa17.05■□□□□ 0.32
RPS29-208ENST00000557519 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
RPS29-208ENST00000557519 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
RPS29-208ENST00000557519 SOGA1O94964 1423 aa17.04■□□□□ 0.32
RPS29-208ENST00000557519 ZNF608Q9ULD9 1512 aaPredicted RBP17.03■□□□□ 0.32
RPS29-208ENST00000557519 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
RPS29-208ENST00000557519 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
RPS29-208ENST00000557519 TOP2BQ02880 1626 aa16.96■□□□□ 0.3
RPS29-208ENST00000557519 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.3
RPS29-208ENST00000557519 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.37e-11■■■■■ 26.9
RPS29-208ENST00000557519 OSCARQ8IYS5 282 aa16.94■□□□□ 0.3
RPS29-208ENST00000557519 ABCA10Q8WWZ4 1543 aa16.9■□□□□ 0.3
RPS29-208ENST00000557519 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.3
RPS29-208ENST00000557519 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
RPS29-208ENST00000557519 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
RPS29-208ENST00000557519 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
RPS29-208ENST00000557519 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
RPS29-208ENST00000557519 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
RPS29-208ENST00000557519 CHD1O14646 1710 aa16.84■□□□□ 0.29
RPS29-208ENST00000557519 SNAPC4Q5SXM2 1469 aa16.83■□□□□ 0.28
RPS29-208ENST00000557519 ABCA5Q8WWZ7 1642 aa16.83■□□□□ 0.28
RPS29-208ENST00000557519 FBLN2P98095 1184 aa16.82■□□□□ 0.28
RPS29-208ENST00000557519 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
RPS29-208ENST00000557519 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
RPS29-208ENST00000557519 ERICH3Q5RHP9 1530 aa16.73■□□□□ 0.27
RPS29-208ENST00000557519 ADAMTS12P58397 1594 aa16.69■□□□□ 0.26
RPS29-208ENST00000557519 FHAD1B1AJZ9 1412 aa16.67■□□□□ 0.26
RPS29-208ENST00000557519 KIF27Q86VH2 1401 aa16.66■□□□□ 0.26
RPS29-208ENST00000557519 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
RPS29-208ENST00000557519 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
RPS29-208ENST00000557519 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
RPS29-208ENST00000557519 ARHGEF11O15085 1522 aa16.65■□□□□ 0.26
RPS29-208ENST00000557519 GRIN2AQ12879 1464 aa16.64■□□□□ 0.25
RPS29-208ENST00000557519 CLASP1Q7Z460 1538 aa16.64■□□□□ 0.25
RPS29-208ENST00000557519 CUL7Q14999 1698 aa16.6■□□□□ 0.25
RPS29-208ENST00000557519 TRIM41Q8WV44 630 aa16.6■□□□□ 0.25
RPS29-208ENST00000557519 NUP160Q12769 1436 aa16.55■□□□□ 0.24
RPS29-208ENST00000557519 CEP170Q5SW79 1584 aa16.52■□□□□ 0.24
RPS29-208ENST00000557519 IGF1RP08069 1367 aa16.51■□□□□ 0.23
RPS29-208ENST00000557519 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
RPS29-208ENST00000557519 CYB5RLQ6IPT4 315 aa16.47■□□□□ 0.23
RPS29-208ENST00000557519 CARMIL1Q5VZK9 1371 aa16.46■□□□□ 0.23
RPS29-208ENST00000557519 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
RPS29-208ENST00000557519 RUSC2Q8N2Y8 1516 aa16.45■□□□□ 0.22
RPS29-208ENST00000557519 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms