RNA–Protein interactions for RNA: ENST00000530651.5

PSMC3-207, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 5

Gene PSMC3, Length 905 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-207ENST00000530651 NISCHQ9Y2I1 1504 aa32.42■■■□□ 2.78
PSMC3-207ENST00000530651 ABCC9O60706 1549 aa30.42■■■□□ 2.46
PSMC3-207ENST00000530651 CCDC180Q9P1Z9 1646 aa29.49■■■□□ 2.31
PSMC3-207ENST00000530651 DNAJC5BQ9UF47 199 aa29.37■■■□□ 2.29
PSMC3-207ENST00000530651 RB1CC1Q8TDY2 1594 aa28.49■■■□□ 2.15
PSMC3-207ENST00000530651 PABPN1Q86U42 306 aaKnown RBP eCLIP28.17■■■□□ 2.1
PSMC3-207ENST00000530651 NACADO15069 1562 aa28.05■■■□□ 2.08
PSMC3-207ENST00000530651 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
PSMC3-207ENST00000530651 BICRAQ9NZM4 1560 aa27.78■■■□□ 2.04
PSMC3-207ENST00000530651 DCAF8L2P0C7V8 631 aa27.76■■■□□ 2.03
PSMC3-207ENST00000530651 DNAJC5Q9H3Z4 198 aa27.52■■■□□ 2
PSMC3-207ENST00000530651 CECR2Q9BXF3 1484 aa27.45■■□□□ 1.99
PSMC3-207ENST00000530651 CC2D2AQ9P2K1 1620 aa27.43■■□□□ 1.98
PSMC3-207ENST00000530651 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
PSMC3-207ENST00000530651 SHROOM4Q9ULL8 1493 aa27.14■■□□□ 1.94
PSMC3-207ENST00000530651 EIF4G1Q04637 1599 aaKnown RBP27.12■■□□□ 1.93
PSMC3-207ENST00000530651 SCRIBQ14160 1630 aa26.9■■□□□ 1.9
PSMC3-207ENST00000530651 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
PSMC3-207ENST00000530651 DCAF1Q9Y4B6 1507 aa26.67■■□□□ 1.86
PSMC3-207ENST00000530651 CUX2O14529 1486 aa26.49■■□□□ 1.83
PSMC3-207ENST00000530651 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
PSMC3-207ENST00000530651 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
PSMC3-207ENST00000530651 NESP48681 1621 aa25.91■■□□□ 1.74
PSMC3-207ENST00000530651 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
PSMC3-207ENST00000530651 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
PSMC3-207ENST00000530651 ATAD2BQ9ULI0 1458 aa25.74■■□□□ 1.71
PSMC3-207ENST00000530651 HMGXB3Q12766 1538 aa25.65■■□□□ 1.7
PSMC3-207ENST00000530651 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
PSMC3-207ENST00000530651 KIF21AQ7Z4S6 1674 aa25.57■■□□□ 1.68
PSMC3-207ENST00000530651 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
PSMC3-207ENST00000530651 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
PSMC3-207ENST00000530651 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
PSMC3-207ENST00000530651 PDS5BQ9NTI5 1447 aa25.32■■□□□ 1.64
PSMC3-207ENST00000530651 BAZ1AQ9NRL2 1556 aaPredicted RBP25.3■■□□□ 1.64
PSMC3-207ENST00000530651 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
PSMC3-207ENST00000530651 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
PSMC3-207ENST00000530651 WDR62O43379 1518 aa25.19■■□□□ 1.62
PSMC3-207ENST00000530651 OSCARQ8IYS5 282 aa25.11■■□□□ 1.61
PSMC3-207ENST00000530651 CADPSQ9ULU8 1353 aa25.07■■□□□ 1.6
PSMC3-207ENST00000530651 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
PSMC3-207ENST00000530651 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
PSMC3-207ENST00000530651 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
PSMC3-207ENST00000530651 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
PSMC3-207ENST00000530651 CEP164Q9UPV0 1460 aa24.92■■□□□ 1.58
PSMC3-207ENST00000530651 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
PSMC3-207ENST00000530651 ARHGEF11O15085 1522 aa24.8■■□□□ 1.56
PSMC3-207ENST00000530651 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
PSMC3-207ENST00000530651 WIZO95785 1651 aa24.72■■□□□ 1.55
PSMC3-207ENST00000530651 TRHP20396 242 aaPredicted RBP24.65■■□□□ 1.54
PSMC3-207ENST00000530651 CYB5RLQ6IPT4 315 aa24.64■■□□□ 1.54
PSMC3-207ENST00000530651 CFTRP13569 1480 aa24.62■■□□□ 1.53
PSMC3-207ENST00000530651 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
PSMC3-207ENST00000530651 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
PSMC3-207ENST00000530651 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
PSMC3-207ENST00000530651 IFT140Q96RY7 1462 aa24.45■■□□□ 1.5
PSMC3-207ENST00000530651 CHD1O14646 1710 aa24.44■■□□□ 1.5
PSMC3-207ENST00000530651 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
PSMC3-207ENST00000530651 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
PSMC3-207ENST00000530651 TOPBP1Q92547 1522 aa24.29■■□□□ 1.48
PSMC3-207ENST00000530651 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
PSMC3-207ENST00000530651 TOP2AP11388 1531 aaKnown RBP24.27■■□□□ 1.48
PSMC3-207ENST00000530651 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.471e-6■■■■□ 20.8
PSMC3-207ENST00000530651 FBLN2P98095 1184 aa24.21■■□□□ 1.47
PSMC3-207ENST00000530651 TARBP1Q13395 1621 aaKnown RBP24.16■■□□□ 1.46
PSMC3-207ENST00000530651 DNMBPQ6XZF7 1577 aa24.1■■□□□ 1.45
PSMC3-207ENST00000530651 CLASP1Q7Z460 1538 aa24.07■■□□□ 1.44
PSMC3-207ENST00000530651 ABCC8Q09428 1581 aa24.05■■□□□ 1.44
PSMC3-207ENST00000530651 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
PSMC3-207ENST00000530651 POLA1P09884 1462 aaPredicted RBP23.97■■□□□ 1.43
PSMC3-207ENST00000530651 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
PSMC3-207ENST00000530651 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
PSMC3-207ENST00000530651 TDRD9Q8NDG6 1382 aaKnown RBP23.92■■□□□ 1.42
PSMC3-207ENST00000530651 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
PSMC3-207ENST00000530651 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
PSMC3-207ENST00000530651 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
PSMC3-207ENST00000530651 SOGA1O94964 1423 aa23.81■■□□□ 1.4
PSMC3-207ENST00000530651 MAGI1Q96QZ7 1491 aaPredicted RBP23.78■■□□□ 1.4
PSMC3-207ENST00000530651 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
PSMC3-207ENST00000530651 SYNJ2O15056 1496 aa23.73■■□□□ 1.39
PSMC3-207ENST00000530651 ERCC6L2Q5T890 1561 aa23.7■■□□□ 1.38
PSMC3-207ENST00000530651 GRIN2BQ13224 1484 aa23.7■■□□□ 1.38
PSMC3-207ENST00000530651 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
PSMC3-207ENST00000530651 ILDR1Q86SU0 546 aaPredicted RBP23.69■■□□□ 1.38
PSMC3-207ENST00000530651 KIF13AQ9H1H9 1805 aa23.68■■□□□ 1.38
PSMC3-207ENST00000530651 PBRM1Q86U86 1689 aa23.64■■□□□ 1.38
PSMC3-207ENST00000530651 CUX1P39880 1505 aa23.56■■□□□ 1.36
PSMC3-207ENST00000530651 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
PSMC3-207ENST00000530651 KDM4FA0A1W2PPD8 638 aa23.48■■□□□ 1.35
PSMC3-207ENST00000530651 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
PSMC3-207ENST00000530651 GRIN2AQ12879 1464 aa23.43■■□□□ 1.34
PSMC3-207ENST00000530651 SHROOM2Q13796 1616 aa23.41■■□□□ 1.34
PSMC3-207ENST00000530651 NUP160Q12769 1436 aa23.37■■□□□ 1.33
PSMC3-207ENST00000530651 ABCA10Q8WWZ4 1543 aa23.35■■□□□ 1.33
PSMC3-207ENST00000530651 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
PSMC3-207ENST00000530651 FAM69CQ0P6D2 419 aa23.33■■□□□ 1.33
PSMC3-207ENST00000530651 ABCC10Q5T3U5 1492 aa23.31■■□□□ 1.32
PSMC3-207ENST00000530651 KDM6BO15054 1643 aa23.3■■□□□ 1.32
PSMC3-207ENST00000530651 DIP2BQ9P265 1576 aa23.28■■□□□ 1.32
PSMC3-207ENST00000530651 TSPOAP1O95153 1857 aa23.26■■□□□ 1.31
PSMC3-207ENST00000530651 PRG4Q92954 1404 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms