RNA–Protein interactions for RNA: ENST00000439422.1

PRDX4-204, Transcript of peroxiredoxin 4, humanhuman

TSL 3

Gene PRDX4, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDX4-204ENST00000439422 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
PRDX4-204ENST00000439422 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
PRDX4-204ENST00000439422 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
PRDX4-204ENST00000439422 SENP3Q9H4L4 574 aaPredicted RBP18.85■□□□□ 0.61
PRDX4-204ENST00000439422 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
PRDX4-204ENST00000439422 FOXD1Q16676 465 aa17.42■□□□□ 0.38
PRDX4-204ENST00000439422 ADRA2BP18089 450 aa16.85■□□□□ 0.29
PRDX4-204ENST00000439422 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
PRDX4-204ENST00000439422 PIAS4Q8N2W9 510 aaPredicted RBP16.54■□□□□ 0.24
PRDX4-204ENST00000439422 MSH5O43196 834 aa16.1■□□□□ 0.17
PRDX4-204ENST00000439422 PPP4R3CPQ6ZMV5 832 aa15.66■□□□□ 0.1
PRDX4-204ENST00000439422 SCAF1Q9H7N4 1312 aaKnown RBP15.49■□□□□ 0.07
PRDX4-204ENST00000439422 KCNA4P22459 653 aa15.41■□□□□ 0.06
PRDX4-204ENST00000439422 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
PRDX4-204ENST00000439422 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
PRDX4-204ENST00000439422 CNKSR2Q8WXI2 1034 aa15.21■□□□□ 0.03
PRDX4-204ENST00000439422 NPM3O75607 178 aaKnown RBP15.04■□□□□ -0
PRDX4-204ENST00000439422 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
PRDX4-204ENST00000439422 RNF216Q9NWF9 866 aaPredicted RBP14.86□□□□□ -0.03
PRDX4-204ENST00000439422 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
PRDX4-204ENST00000439422 SLC4A1APQ9BWU0 796 aaKnown RBP14.74□□□□□ -0.05
PRDX4-204ENST00000439422 DNAJC5BQ9UF47 199 aa14.53□□□□□ -0.08
PRDX4-204ENST00000439422 DCAF8L1A6NGE4 600 aa14.48□□□□□ -0.09
PRDX4-204ENST00000439422 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
PRDX4-204ENST00000439422 POTEDQ86YR6 584 aa14.47□□□□□ -0.09
PRDX4-204ENST00000439422 FOXD4L1Q9NU39 408 aa14.19□□□□□ -0.14
PRDX4-204ENST00000439422 CSRNP3Q8WYN3 585 aa14.16□□□□□ -0.14
PRDX4-204ENST00000439422 ZBTB22O15209 634 aa14.14□□□□□ -0.15
PRDX4-204ENST00000439422 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
PRDX4-204ENST00000439422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.13□□□□□ -0.15
PRDX4-204ENST00000439422 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
PRDX4-204ENST00000439422 U3KPZ7 1027 aaPredicted RBP13.86□□□□□ -0.19
PRDX4-204ENST00000439422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.79□□□□□ -0.2
PRDX4-204ENST00000439422 HNRNPUL2Q1KMD3 747 aaKnown RBP13.79□□□□□ -0.2
PRDX4-204ENST00000439422 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
PRDX4-204ENST00000439422 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
PRDX4-204ENST00000439422 APLP2Q06481 763 aa13.67□□□□□ -0.22
PRDX4-204ENST00000439422 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
PRDX4-204ENST00000439422 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
PRDX4-204ENST00000439422 ATF5Q9Y2D1 282 aaPredicted RBP13.49□□□□□ -0.25
PRDX4-204ENST00000439422 CAPN15O75808 1086 aa13.45□□□□□ -0.26
PRDX4-204ENST00000439422 SPINK5Q9NQ38 1064 aaPredicted RBP13.44□□□□□ -0.26
PRDX4-204ENST00000439422 ZNF219Q9P2Y4 722 aaPredicted RBP13.42□□□□□ -0.26
PRDX4-204ENST00000439422 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
PRDX4-204ENST00000439422 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
PRDX4-204ENST00000439422 ABCB7O75027 752 aa13.2□□□□□ -0.3
PRDX4-204ENST00000439422 POLA2Q14181 598 aa13.17□□□□□ -0.3
PRDX4-204ENST00000439422 DSG3P32926 999 aa13.12□□□□□ -0.31
PRDX4-204ENST00000439422 FBLN2P98095 1184 aa13.03□□□□□ -0.32
PRDX4-204ENST00000439422 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
PRDX4-204ENST00000439422 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
PRDX4-204ENST00000439422 FKBP8Q14318 412 aa12.88□□□□□ -0.35
PRDX4-204ENST00000439422 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
PRDX4-204ENST00000439422 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
PRDX4-204ENST00000439422 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
PRDX4-204ENST00000439422 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
PRDX4-204ENST00000439422 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
PRDX4-204ENST00000439422 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
PRDX4-204ENST00000439422 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
PRDX4-204ENST00000439422 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
PRDX4-204ENST00000439422 PROM2Q8N271 834 aa12.47□□□□□ -0.41
PRDX4-204ENST00000439422 PABPN1Q86U42 306 aaKnown RBP eCLIP12.45□□□□□ -0.42
PRDX4-204ENST00000439422 AKT1S1Q96B36 256 aa12.41□□□□□ -0.42
PRDX4-204ENST00000439422 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
PRDX4-204ENST00000439422 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
PRDX4-204ENST00000439422 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
PRDX4-204ENST00000439422 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
PRDX4-204ENST00000439422 CLEC11AQ9Y240 323 aa12.23□□□□□ -0.45
PRDX4-204ENST00000439422 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
PRDX4-204ENST00000439422 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
PRDX4-204ENST00000439422 PLCD3Q8N3E9 789 aa12.12□□□□□ -0.47
PRDX4-204ENST00000439422 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
PRDX4-204ENST00000439422 PLEKHG5O94827 1062 aa12.09□□□□□ -0.47
PRDX4-204ENST00000439422 MIER1Q8N108 512 aa12.08□□□□□ -0.48
PRDX4-204ENST00000439422 KLHL34Q8N239 644 aa12.02□□□□□ -0.49
PRDX4-204ENST00000439422 IFNLR1Q8IU57 520 aaPredicted RBP11.99□□□□□ -0.49
PRDX4-204ENST00000439422 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
PRDX4-204ENST00000439422 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
PRDX4-204ENST00000439422 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
PRDX4-204ENST00000439422 CREBZFQ9NS37 354 aa11.93□□□□□ -0.5
PRDX4-204ENST00000439422 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
PRDX4-204ENST00000439422 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
PRDX4-204ENST00000439422 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
PRDX4-204ENST00000439422 FXR2P51116 673 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRDX4-204ENST00000439422 RTN4Q9NQC3 1192 aaKnown RBP11.86□□□□□ -0.51
PRDX4-204ENST00000439422 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
PRDX4-204ENST00000439422 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
PRDX4-204ENST00000439422 MNX1P50219 401 aaPredicted RBP11.77□□□□□ -0.53
PRDX4-204ENST00000439422 FARP1Q9Y4F1 1045 aaPredicted RBP11.76□□□□□ -0.53
PRDX4-204ENST00000439422 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
PRDX4-204ENST00000439422 NUBP1P53384 320 aa11.7□□□□□ -0.54
PRDX4-204ENST00000439422 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
PRDX4-204ENST00000439422 GSE1Q14687 1217 aa11.67□□□□□ -0.54
PRDX4-204ENST00000439422 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
PRDX4-204ENST00000439422 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
PRDX4-204ENST00000439422 PKD2Q13563 968 aa11.63□□□□□ -0.55
PRDX4-204ENST00000439422 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
PRDX4-204ENST00000439422 ECM2O94769 699 aaPredicted RBP11.62□□□□□ -0.55
PRDX4-204ENST00000439422 TRIM41Q8WV44 630 aa11.6□□□□□ -0.55
PRDX4-204ENST00000439422 TSPYL2Q9H2G4 693 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms