RNA–Protein interactions for RNA: ENST00000580814.1

TSG101-211, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-211ENST00000580814 AEBP2Q6ZN18 517 aaPredicted RBP26.58■■□□□ 1.85
TSG101-211ENST00000580814 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
TSG101-211ENST00000580814 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
TSG101-211ENST00000580814 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
TSG101-211ENST00000580814 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
TSG101-211ENST00000580814 FOXD1Q16676 465 aa20.84■□□□□ 0.93
TSG101-211ENST00000580814 PPP6R1Q9UPN7 881 aa20.34■□□□□ 0.85
TSG101-211ENST00000580814 ADRA2BP18089 450 aa20.31■□□□□ 0.84
TSG101-211ENST00000580814 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
TSG101-211ENST00000580814 PIAS4Q8N2W9 510 aaPredicted RBP19.71■□□□□ 0.75
TSG101-211ENST00000580814 MSH5O43196 834 aa19.12■□□□□ 0.65
TSG101-211ENST00000580814 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
TSG101-211ENST00000580814 KCNA4P22459 653 aa18.94■□□□□ 0.62
TSG101-211ENST00000580814 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
TSG101-211ENST00000580814 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
TSG101-211ENST00000580814 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
TSG101-211ENST00000580814 NPM3O75607 178 aaKnown RBP18.34■□□□□ 0.53
TSG101-211ENST00000580814 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.52
TSG101-211ENST00000580814 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
TSG101-211ENST00000580814 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
TSG101-211ENST00000580814 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
TSG101-211ENST00000580814 EHMT2Q96KQ7 1210 aa17.93■□□□□ 0.46
TSG101-211ENST00000580814 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
TSG101-211ENST00000580814 HOXD11P31277 338 aaPredicted RBP17.84■□□□□ 0.45
TSG101-211ENST00000580814 CSRNP3Q8WYN3 585 aa17.65■□□□□ 0.42
TSG101-211ENST00000580814 ZBTB22O15209 634 aa17.44■□□□□ 0.38
TSG101-211ENST00000580814 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
TSG101-211ENST00000580814 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
TSG101-211ENST00000580814 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
TSG101-211ENST00000580814 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
TSG101-211ENST00000580814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
TSG101-211ENST00000580814 CACNB1Q02641 598 aaPredicted RBP16.81■□□□□ 0.28
TSG101-211ENST00000580814 ATXN8OSP0DMR3 200 aa16.79■□□□□ 0.28
TSG101-211ENST00000580814 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
TSG101-211ENST00000580814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
TSG101-211ENST00000580814 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
TSG101-211ENST00000580814 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
TSG101-211ENST00000580814 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
TSG101-211ENST00000580814 APLP2Q06481 763 aa16.42■□□□□ 0.22
TSG101-211ENST00000580814 RNF39Q9H2S5 420 aa16.41■□□□□ 0.22
TSG101-211ENST00000580814 C1QBPQ07021 282 aaKnown RBP16.26■□□□□ 0.19
TSG101-211ENST00000580814 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
TSG101-211ENST00000580814 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
TSG101-211ENST00000580814 CAPN15O75808 1086 aa16.03■□□□□ 0.16
TSG101-211ENST00000580814 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
TSG101-211ENST00000580814 POLA2Q14181 598 aa15.89■□□□□ 0.13
TSG101-211ENST00000580814 FKBP8Q14318 412 aa15.89■□□□□ 0.13
TSG101-211ENST00000580814 MKRN4PQ13434 485 aaPredicted RBP15.76■□□□□ 0.11
TSG101-211ENST00000580814 FBLN2P98095 1184 aa15.75■□□□□ 0.11
TSG101-211ENST00000580814 DSG3P32926 999 aa15.73■□□□□ 0.11
TSG101-211ENST00000580814 ABCB7O75027 752 aa15.72■□□□□ 0.11
TSG101-211ENST00000580814 ZBTB12Q9Y330 459 aaPredicted RBP15.69■□□□□ 0.1
TSG101-211ENST00000580814 POTEHQ6S545 545 aa15.62■□□□□ 0.09
TSG101-211ENST00000580814 SPDYE4A6NLX3 237 aa15.57■□□□□ 0.08
TSG101-211ENST00000580814 PROM2Q8N271 834 aa15.43■□□□□ 0.06
TSG101-211ENST00000580814 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
TSG101-211ENST00000580814 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
TSG101-211ENST00000580814 SPDYE2Q495Y8 402 aa15.3■□□□□ 0.04
TSG101-211ENST00000580814 FBXO3Q9UK99 471 aa15.3■□□□□ 0.04
TSG101-211ENST00000580814 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
TSG101-211ENST00000580814 ZNF692Q9BU19 519 aaPredicted RBP15.26■□□□□ 0.03
TSG101-211ENST00000580814 SSUH2Q9Y2M2 353 aa15.22■□□□□ 0.03
TSG101-211ENST00000580814 AMER1Q5JTC6 1135 aaPredicted RBP15.15■□□□□ 0.02
TSG101-211ENST00000580814 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 0
TSG101-211ENST00000580814 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
TSG101-211ENST00000580814 VASPP50552 380 aaPredicted RBP15.04■□□□□ -0
TSG101-211ENST00000580814 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
TSG101-211ENST00000580814 STAG3Q9UJ98 1225 aa14.98□□□□□ -0.01
TSG101-211ENST00000580814 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
TSG101-211ENST00000580814 IFNLR1Q8IU57 520 aaPredicted RBP14.87□□□□□ -0.03
TSG101-211ENST00000580814 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
TSG101-211ENST00000580814 MIER1Q8N108 512 aa14.73□□□□□ -0.05
TSG101-211ENST00000580814 PLCD3Q8N3E9 789 aa14.73□□□□□ -0.05
TSG101-211ENST00000580814 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
TSG101-211ENST00000580814 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
TSG101-211ENST00000580814 SPOCK2Q92563 424 aa14.65□□□□□ -0.06
TSG101-211ENST00000580814 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
TSG101-211ENST00000580814 ZBTB47Q9UFB7 747 aaPredicted RBP14.61□□□□□ -0.07
TSG101-211ENST00000580814 CLEC11AQ9Y240 323 aa14.6□□□□□ -0.07
TSG101-211ENST00000580814 PRR29P0C7W0 189 aa14.57□□□□□ -0.08
TSG101-211ENST00000580814 PITPNM1O00562 1244 aa14.52□□□□□ -0.09
TSG101-211ENST00000580814 PKD2Q13563 968 aa14.52□□□□□ -0.09
TSG101-211ENST00000580814 CREBZFQ9NS37 354 aa14.47□□□□□ -0.09
TSG101-211ENST00000580814 MNX1P50219 401 aaPredicted RBP14.39□□□□□ -0.11
TSG101-211ENST00000580814 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
TSG101-211ENST00000580814 NUBP1P53384 320 aa14.34□□□□□ -0.11
TSG101-211ENST00000580814 CIZ1Q9ULV3 898 aaPredicted RBP14.31□□□□□ -0.12
TSG101-211ENST00000580814 GSE1Q14687 1217 aa14.29□□□□□ -0.12
TSG101-211ENST00000580814 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
TSG101-211ENST00000580814 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
TSG101-211ENST00000580814 FXR2P51116 673 aaKnown RBP eCLIP14.23□□□□□ -0.13
TSG101-211ENST00000580814 DCAF8Q5TAQ9 597 aa14.21□□□□□ -0.13
TSG101-211ENST00000580814 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
TSG101-211ENST00000580814 CHADLQ6NUI6 762 aa14.2□□□□□ -0.14
TSG101-211ENST00000580814 CHRDL2Q6WN34 429 aa14.2□□□□□ -0.14
TSG101-211ENST00000580814 SLC24A1O60721 1099 aa14.19□□□□□ -0.14
TSG101-211ENST00000580814 FAM212AQ96EL1 285 aa14.19□□□□□ -0.14
TSG101-211ENST00000580814 RGL2O15211 777 aa14.18□□□□□ -0.14
TSG101-211ENST00000580814 RASEFQ8IZ41 740 aa14.17□□□□□ -0.14
TSG101-211ENST00000580814 FARP1Q9Y4F1 1045 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms