RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 AEBP2Q6ZN18 517 aaPredicted RBP24.36■■□□□ 1.49
FN1-216ENST00000469569 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
FN1-216ENST00000469569 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
FN1-216ENST00000469569 PHF23Q9BUL5 403 aaPredicted RBP21.02■□□□□ 0.96
FN1-216ENST00000469569 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
FN1-216ENST00000469569 CCDC180Q9P1Z9 1646 aa19.44■□□□□ 0.7
FN1-216ENST00000469569 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
FN1-216ENST00000469569 FOXD1Q16676 465 aa19.15■□□□□ 0.66
FN1-216ENST00000469569 ABCC9O60706 1549 aa18.93■□□□□ 0.62
FN1-216ENST00000469569 ADRA2BP18089 450 aa18.53■□□□□ 0.56
FN1-216ENST00000469569 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
FN1-216ENST00000469569 NACADO15069 1562 aa18.33■□□□□ 0.52
FN1-216ENST00000469569 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
FN1-216ENST00000469569 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
FN1-216ENST00000469569 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
FN1-216ENST00000469569 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
FN1-216ENST00000469569 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
FN1-216ENST00000469569 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
FN1-216ENST00000469569 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
FN1-216ENST00000469569 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
FN1-216ENST00000469569 SHROOM4Q9ULL8 1493 aa17.67■□□□□ 0.42
FN1-216ENST00000469569 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
FN1-216ENST00000469569 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
FN1-216ENST00000469569 MSH5O43196 834 aa17.6■□□□□ 0.41
FN1-216ENST00000469569 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
FN1-216ENST00000469569 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
FN1-216ENST00000469569 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
FN1-216ENST00000469569 CC2D2AQ9P2K1 1620 aa17.13■□□□□ 0.33
FN1-216ENST00000469569 CECR2Q9BXF3 1484 aa17.06■□□□□ 0.32
FN1-216ENST00000469569 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
FN1-216ENST00000469569 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
FN1-216ENST00000469569 SMARCA2P51531 1590 aa16.91■□□□□ 0.3
FN1-216ENST00000469569 NCAPD3P42695 1498 aa16.91■□□□□ 0.3
FN1-216ENST00000469569 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
FN1-216ENST00000469569 KCNA4P22459 653 aa16.88■□□□□ 0.29
FN1-216ENST00000469569 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
FN1-216ENST00000469569 PEG3Q9GZU2 1588 aa16.82■□□□□ 0.28
FN1-216ENST00000469569 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
FN1-216ENST00000469569 MROH2BQ7Z745 1585 aa16.8■□□□□ 0.28
FN1-216ENST00000469569 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
FN1-216ENST00000469569 BAZ1BQ9UIG0 1483 aaKnown RBP16.75■□□□□ 0.27
FN1-216ENST00000469569 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
FN1-216ENST00000469569 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
FN1-216ENST00000469569 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
FN1-216ENST00000469569 WIZO95785 1651 aa16.58■□□□□ 0.24
FN1-216ENST00000469569 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
FN1-216ENST00000469569 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
FN1-216ENST00000469569 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
FN1-216ENST00000469569 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
FN1-216ENST00000469569 CADPSQ9ULU8 1353 aa16.42■□□□□ 0.22
FN1-216ENST00000469569 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
FN1-216ENST00000469569 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
FN1-216ENST00000469569 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
FN1-216ENST00000469569 NESP48681 1621 aa16.35■□□□□ 0.21
FN1-216ENST00000469569 CFTRP13569 1480 aa16.3■□□□□ 0.2
FN1-216ENST00000469569 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
FN1-216ENST00000469569 SUPT5HO00267 1087 aaKnown RBP16.27■□□□□ 0.2
FN1-216ENST00000469569 RNF216Q9NWF9 866 aaPredicted RBP16.27■□□□□ 0.2
FN1-216ENST00000469569 CUX2O14529 1486 aa16.25■□□□□ 0.19
FN1-216ENST00000469569 FANCD2Q9BXW9 1451 aa16.19■□□□□ 0.18
FN1-216ENST00000469569 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
FN1-216ENST00000469569 HOXD11P31277 338 aaPredicted RBP16.18■□□□□ 0.18
FN1-216ENST00000469569 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
FN1-216ENST00000469569 KIF21AQ7Z4S6 1674 aa16.14■□□□□ 0.18
FN1-216ENST00000469569 THOC2Q8NI27 1593 aaKnown RBP16.11■□□□□ 0.17
FN1-216ENST00000469569 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
FN1-216ENST00000469569 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
FN1-216ENST00000469569 WDR62O43379 1518 aa16.06■□□□□ 0.16
FN1-216ENST00000469569 ABCC8Q09428 1581 aa16.05■□□□□ 0.16
FN1-216ENST00000469569 URB2Q14146 1524 aaKnown RBP15.97■□□□□ 0.15
FN1-216ENST00000469569 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
FN1-216ENST00000469569 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
FN1-216ENST00000469569 IFT140Q96RY7 1462 aa15.87■□□□□ 0.13
FN1-216ENST00000469569 DCAF8L1A6NGE4 600 aa15.83■□□□□ 0.12
FN1-216ENST00000469569 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
FN1-216ENST00000469569 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
FN1-216ENST00000469569 CUX1P39880 1505 aa15.77■□□□□ 0.11
FN1-216ENST00000469569 SOGA1O94964 1423 aa15.77■□□□□ 0.11
FN1-216ENST00000469569 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
FN1-216ENST00000469569 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
FN1-216ENST00000469569 DNAJC5Q9H3Z4 198 aa15.71■□□□□ 0.11
FN1-216ENST00000469569 WDR97A6NE52 1622 aa15.71■□□□□ 0.11
FN1-216ENST00000469569 TARBP1Q13395 1621 aaKnown RBP15.7■□□□□ 0.1
FN1-216ENST00000469569 TOP2BQ02880 1626 aa15.68■□□□□ 0.1
FN1-216ENST00000469569 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
FN1-216ENST00000469569 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
FN1-216ENST00000469569 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
FN1-216ENST00000469569 AQRO60306 1485 aaKnown RBP eCLIP15.63■□□□□ 0.099e-28■■■■■ 27.6
FN1-216ENST00000469569 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
FN1-216ENST00000469569 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
FN1-216ENST00000469569 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
FN1-216ENST00000469569 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
FN1-216ENST00000469569 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
FN1-216ENST00000469569 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
FN1-216ENST00000469569 GAPVD1Q14C86 1478 aa15.58■□□□□ 0.08
FN1-216ENST00000469569 MAGI1Q96QZ7 1491 aaPredicted RBP15.55■□□□□ 0.08
FN1-216ENST00000469569 ZBTB22O15209 634 aa15.54■□□□□ 0.08
FN1-216ENST00000469569 SLC4A2P04920 1241 aa15.54■□□□□ 0.08
FN1-216ENST00000469569 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
FN1-216ENST00000469569 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms