RNA–Protein interactions for RNA: ENST00000530912.5

PSMC3-209, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 5 BASIC

Gene PSMC3, Length 1,390 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-209ENST00000530912 NISCHQ9Y2I1 1504 aa36.88■■■■□ 3.49
PSMC3-209ENST00000530912 CCDC180Q9P1Z9 1646 aa32.84■■■□□ 2.85
PSMC3-209ENST00000530912 ABCC9O60706 1549 aa32.31■■■□□ 2.76
PSMC3-209ENST00000530912 RB1CC1Q8TDY2 1594 aa30.95■■■□□ 2.55
PSMC3-209ENST00000530912 NACADO15069 1562 aa30.87■■■□□ 2.53
PSMC3-209ENST00000530912 DCAF8L2P0C7V8 631 aa30.8■■■□□ 2.52
PSMC3-209ENST00000530912 ZCCHC6Q5VYS8 1495 aaKnown RBP30.72■■■□□ 2.51
PSMC3-209ENST00000530912 MYO15BQ96JP2 1530 aa30.62■■■□□ 2.49
PSMC3-209ENST00000530912 DCAF1Q9Y4B6 1507 aa30.46■■■□□ 2.47
PSMC3-209ENST00000530912 UNC13AQ9UPW8 1703 aa30.4■■■□□ 2.46
PSMC3-209ENST00000530912 DNAJC5BQ9UF47 199 aa30.35■■■□□ 2.45
PSMC3-209ENST00000530912 PABPN1Q86U42 306 aaKnown RBP eCLIP30.15■■■□□ 2.42
PSMC3-209ENST00000530912 BICRAQ9NZM4 1560 aa30.14■■■□□ 2.42
PSMC3-209ENST00000530912 SCRIBQ14160 1630 aa30.01■■■□□ 2.39
PSMC3-209ENST00000530912 SHROOM4Q9ULL8 1493 aa29.62■■■□□ 2.33
PSMC3-209ENST00000530912 EIF4G1Q04637 1599 aaKnown RBP29.29■■■□□ 2.28
PSMC3-209ENST00000530912 CC2D2AQ9P2K1 1620 aa29.23■■■□□ 2.27
PSMC3-209ENST00000530912 CECR2Q9BXF3 1484 aa29■■■□□ 2.23
PSMC3-209ENST00000530912 SMARCA4P51532 1647 aa28.67■■■□□ 2.18
PSMC3-209ENST00000530912 BAZ1AQ9NRL2 1556 aaPredicted RBP28.56■■■□□ 2.16
PSMC3-209ENST00000530912 ATAD2BQ9ULI0 1458 aa28.53■■■□□ 2.16
PSMC3-209ENST00000530912 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
PSMC3-209ENST00000530912 MROH2BQ7Z745 1585 aa28.47■■■□□ 2.15
PSMC3-209ENST00000530912 DNAJC5Q9H3Z4 198 aa28.47■■■□□ 2.15
PSMC3-209ENST00000530912 SMARCA2P51531 1590 aa28.43■■■□□ 2.14
PSMC3-209ENST00000530912 PEG3Q9GZU2 1588 aa28.37■■■□□ 2.13
PSMC3-209ENST00000530912 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
PSMC3-209ENST00000530912 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
PSMC3-209ENST00000530912 WIZO95785 1651 aa28.18■■■□□ 2.1
PSMC3-209ENST00000530912 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
PSMC3-209ENST00000530912 NESP48681 1621 aa27.96■■■□□ 2.07
PSMC3-209ENST00000530912 CUX2O14529 1486 aa27.85■■■□□ 2.05
PSMC3-209ENST00000530912 TOP2AP11388 1531 aaKnown RBP27.81■■■□□ 2.04
PSMC3-209ENST00000530912 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
PSMC3-209ENST00000530912 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
PSMC3-209ENST00000530912 CADPSQ9ULU8 1353 aa27.64■■■□□ 2.02
PSMC3-209ENST00000530912 KIF21AQ7Z4S6 1674 aa27.63■■■□□ 2.01
PSMC3-209ENST00000530912 THOC2Q8NI27 1593 aaKnown RBP27.56■■■□□ 2
PSMC3-209ENST00000530912 PDS5BQ9NTI5 1447 aa27.53■■■□□ 2
PSMC3-209ENST00000530912 CCDC88BA6NC98 1476 aa27.48■■□□□ 1.99
PSMC3-209ENST00000530912 CFTRP13569 1480 aa27.48■■□□□ 1.99
PSMC3-209ENST00000530912 FANCD2Q9BXW9 1451 aa27.36■■□□□ 1.97
PSMC3-209ENST00000530912 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
PSMC3-209ENST00000530912 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
PSMC3-209ENST00000530912 PRDM2Q13029 1718 aa27.31■■□□□ 1.96
PSMC3-209ENST00000530912 WDR62O43379 1518 aa27.26■■□□□ 1.95
PSMC3-209ENST00000530912 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.94
PSMC3-209ENST00000530912 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
PSMC3-209ENST00000530912 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
PSMC3-209ENST00000530912 DNMBPQ6XZF7 1577 aa26.87■■□□□ 1.89
PSMC3-209ENST00000530912 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
PSMC3-209ENST00000530912 ABCC8Q09428 1581 aa26.81■■□□□ 1.88
PSMC3-209ENST00000530912 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
PSMC3-209ENST00000530912 ZNF608Q9ULD9 1512 aaPredicted RBP26.73■■□□□ 1.87
PSMC3-209ENST00000530912 CUX1P39880 1505 aa26.71■■□□□ 1.87
PSMC3-209ENST00000530912 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.86
PSMC3-209ENST00000530912 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
PSMC3-209ENST00000530912 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
PSMC3-209ENST00000530912 RAD54L2Q9Y4B4 1467 aa26.61■■□□□ 1.85
PSMC3-209ENST00000530912 EIF4G3O43432 1585 aaKnown RBP26.61■■□□□ 1.85
PSMC3-209ENST00000530912 SOGA1O94964 1423 aa26.53■■□□□ 1.84
PSMC3-209ENST00000530912 AQRO60306 1485 aaKnown RBP eCLIP26.53■■□□□ 1.841e-6■■■■□ 20.4
PSMC3-209ENST00000530912 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
PSMC3-209ENST00000530912 SYNJ1O43426 1573 aa26.45■■□□□ 1.83
PSMC3-209ENST00000530912 TDRD9Q8NDG6 1382 aaKnown RBP26.44■■□□□ 1.82
PSMC3-209ENST00000530912 BIVM-ERCC5R4GMW8 1640 aa26.43■■□□□ 1.82
PSMC3-209ENST00000530912 WRNQ14191 1432 aaPredicted RBP eCLIP26.42■■□□□ 1.82
PSMC3-209ENST00000530912 TOP2BQ02880 1626 aa26.4■■□□□ 1.82
PSMC3-209ENST00000530912 OSCARQ8IYS5 282 aa26.34■■□□□ 1.81
PSMC3-209ENST00000530912 CHD1O14646 1710 aa26.33■■□□□ 1.8
PSMC3-209ENST00000530912 ABCA10Q8WWZ4 1543 aa26.32■■□□□ 1.8
PSMC3-209ENST00000530912 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
PSMC3-209ENST00000530912 SNAPC4Q5SXM2 1469 aa26.27■■□□□ 1.8
PSMC3-209ENST00000530912 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
PSMC3-209ENST00000530912 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
PSMC3-209ENST00000530912 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
PSMC3-209ENST00000530912 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
PSMC3-209ENST00000530912 FBLN2P98095 1184 aa26.16■■□□□ 1.78
PSMC3-209ENST00000530912 RIMBP3CA6NJZ7 1639 aa26.15■■□□□ 1.78
PSMC3-209ENST00000530912 RIMBP3BA6NNM3 1639 aa26.15■■□□□ 1.78
PSMC3-209ENST00000530912 RIMBP3Q9UFD9 1639 aa26.15■■□□□ 1.78
PSMC3-209ENST00000530912 SYNJ2O15056 1496 aa26.08■■□□□ 1.77
PSMC3-209ENST00000530912 CHMP7Q8WUX9 453 aaPredicted RBP26.04■■□□□ 1.76
PSMC3-209ENST00000530912 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
PSMC3-209ENST00000530912 ARHGEF11O15085 1522 aa26.01■■□□□ 1.75
PSMC3-209ENST00000530912 CLASP1Q7Z460 1538 aa26.01■■□□□ 1.75
PSMC3-209ENST00000530912 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
PSMC3-209ENST00000530912 GRIN2AQ12879 1464 aa25.94■■□□□ 1.74
PSMC3-209ENST00000530912 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
PSMC3-209ENST00000530912 CEP170Q5SW79 1584 aa25.87■■□□□ 1.73
PSMC3-209ENST00000530912 NUP160Q12769 1436 aa25.83■■□□□ 1.73
PSMC3-209ENST00000530912 KIF27Q86VH2 1401 aa25.83■■□□□ 1.73
PSMC3-209ENST00000530912 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
PSMC3-209ENST00000530912 IGF1RP08069 1367 aa25.8■■□□□ 1.72
PSMC3-209ENST00000530912 CUL7Q14999 1698 aa25.73■■□□□ 1.71
PSMC3-209ENST00000530912 CYB5RLQ6IPT4 315 aa25.72■■□□□ 1.71
PSMC3-209ENST00000530912 ERCC6L2Q5T890 1561 aa25.71■■□□□ 1.71
PSMC3-209ENST00000530912 RUSC2Q8N2Y8 1516 aa25.71■■□□□ 1.71
PSMC3-209ENST00000530912 SHROOM2Q13796 1616 aa25.68■■□□□ 1.7
PSMC3-209ENST00000530912 TRHP20396 242 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms