Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HRH3Q9Y5N1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HRH3Q9Y5N1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.73■■□□□ 1.07
HRH3Q9Y5N1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.73■■□□□ 1.07
HRH3Q9Y5N1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HRH3Q9Y5N1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HRH3Q9Y5N1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.73■■□□□ 1.07
HRH3Q9Y5N1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.73■■□□□ 1.07
HRH3Q9Y5N1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HRH3Q9Y5N1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HRH3Q9Y5N1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HRH3Q9Y5N1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HRH3Q9Y5N1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HRH3Q9Y5N1 LONRF2P2-201ENST00000439212 571 ntBASIC21.72■■□□□ 1.07
HRH3Q9Y5N1 AC019171.1-201ENST00000601251 1056 ntBASIC21.72■■□□□ 1.07
HRH3Q9Y5N1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HRH3Q9Y5N1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
HRH3Q9Y5N1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HRH3Q9Y5N1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HRH3Q9Y5N1 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.71■■□□□ 1.07
HRH3Q9Y5N1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.71■■□□□ 1.07
HRH3Q9Y5N1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.71■■□□□ 1.07
HRH3Q9Y5N1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HRH3Q9Y5N1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HRH3Q9Y5N1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HRH3Q9Y5N1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HRH3Q9Y5N1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HRH3Q9Y5N1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HRH3Q9Y5N1 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.7■■□□□ 1.06
HRH3Q9Y5N1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.7■■□□□ 1.06
HRH3Q9Y5N1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
HRH3Q9Y5N1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HRH3Q9Y5N1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HRH3Q9Y5N1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
HRH3Q9Y5N1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.69■■□□□ 1.06
HRH3Q9Y5N1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HRH3Q9Y5N1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HRH3Q9Y5N1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
HRH3Q9Y5N1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HRH3Q9Y5N1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HRH3Q9Y5N1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HRH3Q9Y5N1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HRH3Q9Y5N1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.68■■□□□ 1.06
HRH3Q9Y5N1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
HRH3Q9Y5N1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
HRH3Q9Y5N1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.68■■□□□ 1.06
HRH3Q9Y5N1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HRH3Q9Y5N1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HRH3Q9Y5N1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
HRH3Q9Y5N1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HRH3Q9Y5N1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.67■■□□□ 1.06
HRH3Q9Y5N1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.67■■□□□ 1.06
HRH3Q9Y5N1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
HRH3Q9Y5N1 GUSBP5-201ENST00000418136 578 ntBASIC21.67■■□□□ 1.06
HRH3Q9Y5N1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.67■■□□□ 1.06
HRH3Q9Y5N1 AL031848.2-201ENST00000607670 837 ntBASIC21.67■■□□□ 1.06
HRH3Q9Y5N1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HRH3Q9Y5N1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HRH3Q9Y5N1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
HRH3Q9Y5N1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
HRH3Q9Y5N1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.66■■□□□ 1.06
HRH3Q9Y5N1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.66■■□□□ 1.06
HRH3Q9Y5N1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HRH3Q9Y5N1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HRH3Q9Y5N1 AC097639.1-201ENST00000565519 1891 ntBASIC21.66■■□□□ 1.06
HRH3Q9Y5N1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
HRH3Q9Y5N1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HRH3Q9Y5N1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HRH3Q9Y5N1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HRH3Q9Y5N1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HRH3Q9Y5N1 AL592295.1-201ENST00000400984 884 ntBASIC21.64■■□□□ 1.05
HRH3Q9Y5N1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.64■■□□□ 1.05
HRH3Q9Y5N1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HRH3Q9Y5N1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HRH3Q9Y5N1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HRH3Q9Y5N1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HRH3Q9Y5N1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HRH3Q9Y5N1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms