Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
ZC3H4Q9UPT8 MIR939-201ENST00000401314 82 ntBASIC29.02■■■□□ 2.24
ZC3H4Q9UPT8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC29.02■■■□□ 2.24
ZC3H4Q9UPT8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC29.02■■■□□ 2.24
ZC3H4Q9UPT8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC29.02■■■□□ 2.24
ZC3H4Q9UPT8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
ZC3H4Q9UPT8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC29.01■■■□□ 2.24
ZC3H4Q9UPT8 ABCB10P1-201ENST00000614297 2181 ntBASIC29.01■■■□□ 2.23
ZC3H4Q9UPT8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC29■■■□□ 2.23
ZC3H4Q9UPT8 AF213884.3-201ENST00000563833 479 ntBASIC29■■■□□ 2.23
ZC3H4Q9UPT8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
ZC3H4Q9UPT8 AC087623.3-201ENST00000607047 1098 ntBASIC28.99■■■□□ 2.23
ZC3H4Q9UPT8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
ZC3H4Q9UPT8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
ZC3H4Q9UPT8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
ZC3H4Q9UPT8 SRD5A1P1-201ENST00000442297 786 ntBASIC28.98■■■□□ 2.23
ZC3H4Q9UPT8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.98■■■□□ 2.23
ZC3H4Q9UPT8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.98■■■□□ 2.23
ZC3H4Q9UPT8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
ZC3H4Q9UPT8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.98■■■□□ 2.23
ZC3H4Q9UPT8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ZC3H4Q9UPT8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.97■■■□□ 2.23
ZC3H4Q9UPT8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.97■■■□□ 2.23
ZC3H4Q9UPT8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC28.97■■■□□ 2.23
ZC3H4Q9UPT8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.97■■■□□ 2.23
ZC3H4Q9UPT8 AC091305.1-201ENST00000479476 895 ntBASIC28.96■■■□□ 2.23
ZC3H4Q9UPT8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
ZC3H4Q9UPT8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
ZC3H4Q9UPT8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
ZC3H4Q9UPT8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC28.95■■■□□ 2.23
ZC3H4Q9UPT8 AP001330.3-201ENST00000520123 633 ntBASIC28.95■■■□□ 2.23
ZC3H4Q9UPT8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.95■■■□□ 2.23
ZC3H4Q9UPT8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
ZC3H4Q9UPT8 GRAMD4P4-201ENST00000613563 1115 ntBASIC28.95■■■□□ 2.23
ZC3H4Q9UPT8 MIR6722-201ENST00000617286 78 ntBASIC28.95■■■□□ 2.23
ZC3H4Q9UPT8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
ZC3H4Q9UPT8 AF131216.4-201ENST00000638924 1588 ntBASIC28.95■■■□□ 2.23
ZC3H4Q9UPT8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.95■■■□□ 2.22
ZC3H4Q9UPT8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
ZC3H4Q9UPT8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
ZC3H4Q9UPT8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
ZC3H4Q9UPT8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.94■■■□□ 2.22
ZC3H4Q9UPT8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
ZC3H4Q9UPT8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
ZC3H4Q9UPT8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.94■■■□□ 2.22
ZC3H4Q9UPT8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
ZC3H4Q9UPT8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.94■■■□□ 2.22
ZC3H4Q9UPT8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.93■■■□□ 2.22
ZC3H4Q9UPT8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
ZC3H4Q9UPT8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
ZC3H4Q9UPT8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
ZC3H4Q9UPT8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
ZC3H4Q9UPT8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
ZC3H4Q9UPT8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ZC3H4Q9UPT8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ZC3H4Q9UPT8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.92■■■□□ 2.22
ZC3H4Q9UPT8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.92■■■□□ 2.22
ZC3H4Q9UPT8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
ZC3H4Q9UPT8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.92■■■□□ 2.22
ZC3H4Q9UPT8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.92■■■□□ 2.22
ZC3H4Q9UPT8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
ZC3H4Q9UPT8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
ZC3H4Q9UPT8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
ZC3H4Q9UPT8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.91■■■□□ 2.22
ZC3H4Q9UPT8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.91■■■□□ 2.22
ZC3H4Q9UPT8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC28.91■■■□□ 2.22
ZC3H4Q9UPT8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
ZC3H4Q9UPT8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.9■■■□□ 2.22
ZC3H4Q9UPT8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC28.9■■■□□ 2.22
ZC3H4Q9UPT8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ZC3H4Q9UPT8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.21
ZC3H4Q9UPT8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.89■■■□□ 2.21
ZC3H4Q9UPT8 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.89■■■□□ 2.21
ZC3H4Q9UPT8 RARRES2P11-201ENST00000635158 484 ntBASIC28.89■■■□□ 2.21
ZC3H4Q9UPT8 AC090192.1-201ENST00000517740 490 ntBASIC28.88■■■□□ 2.21
ZC3H4Q9UPT8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.88■■■□□ 2.21
ZC3H4Q9UPT8 DUX4L19-201ENST00000557448 1267 ntBASIC28.88■■■□□ 2.21
ZC3H4Q9UPT8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC28.88■■■□□ 2.21
ZC3H4Q9UPT8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.88■■■□□ 2.21
ZC3H4Q9UPT8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.88■■■□□ 2.21
ZC3H4Q9UPT8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ZC3H4Q9UPT8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
ZC3H4Q9UPT8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
ZC3H4Q9UPT8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
ZC3H4Q9UPT8 SNX5-217ENST00000606557 1087 ntBASIC28.86■■■□□ 2.21
ZC3H4Q9UPT8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
ZC3H4Q9UPT8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H4Q9UPT8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.85■■■□□ 2.21
ZC3H4Q9UPT8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
ZC3H4Q9UPT8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
ZC3H4Q9UPT8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.84■■■□□ 2.21
ZC3H4Q9UPT8 AC004448.1-201ENST00000458332 883 ntBASIC28.84■■■□□ 2.21
ZC3H4Q9UPT8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.83■■■□□ 2.21
ZC3H4Q9UPT8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.83■■■□□ 2.21
ZC3H4Q9UPT8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
ZC3H4Q9UPT8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ZC3H4Q9UPT8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
ZC3H4Q9UPT8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
ZC3H4Q9UPT8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.82■■■□□ 2.2
ZC3H4Q9UPT8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.82■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms