Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
MAP1LC3AQ9H492 MIR6090-201ENST00000622481 60 ntBASIC17.16■□□□□ 0.34
MAP1LC3AQ9H492 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
MAP1LC3AQ9H492 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
MAP1LC3AQ9H492 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MAP1LC3AQ9H492 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MAP1LC3AQ9H492 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
MAP1LC3AQ9H492 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MAP1LC3AQ9H492 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MAP1LC3AQ9H492 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MAP1LC3AQ9H492 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MAP1LC3AQ9H492 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MAP1LC3AQ9H492 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
MAP1LC3AQ9H492 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MAP1LC3AQ9H492 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MAP1LC3AQ9H492 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MAP1LC3AQ9H492 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MAP1LC3AQ9H492 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MAP1LC3AQ9H492 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MAP1LC3AQ9H492 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MAP1LC3AQ9H492 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MAP1LC3AQ9H492 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MAP1LC3AQ9H492 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MAP1LC3AQ9H492 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.13■□□□□ 0.33
MAP1LC3AQ9H492 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MAP1LC3AQ9H492 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MAP1LC3AQ9H492 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MAP1LC3AQ9H492 AC005559.1-201ENST00000589661 871 ntBASIC17.13■□□□□ 0.33
MAP1LC3AQ9H492 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MAP1LC3AQ9H492 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MAP1LC3AQ9H492 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MAP1LC3AQ9H492 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MAP1LC3AQ9H492 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MAP1LC3AQ9H492 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MAP1LC3AQ9H492 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MAP1LC3AQ9H492 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MAP1LC3AQ9H492 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MAP1LC3AQ9H492 SLC6A10P-202ENST00000431994 2058 ntBASIC17.08■□□□□ 0.33
MAP1LC3AQ9H492 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.08■□□□□ 0.33
MAP1LC3AQ9H492 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MAP1LC3AQ9H492 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MAP1LC3AQ9H492 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.08■□□□□ 0.32
MAP1LC3AQ9H492 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MAP1LC3AQ9H492 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.08■□□□□ 0.32
MAP1LC3AQ9H492 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MAP1LC3AQ9H492 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MAP1LC3AQ9H492 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms