Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
TIMP4Q99727 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TIMP4Q99727 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TIMP4Q99727 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
TIMP4Q99727 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TIMP4Q99727 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
TIMP4Q99727 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TIMP4Q99727 LONRF2P2-201ENST00000439212 571 ntBASIC21.64■■□□□ 1.05
TIMP4Q99727 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.64■■□□□ 1.05
TIMP4Q99727 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TIMP4Q99727 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TIMP4Q99727 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.64■■□□□ 1.05
TIMP4Q99727 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TIMP4Q99727 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TIMP4Q99727 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
TIMP4Q99727 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TIMP4Q99727 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TIMP4Q99727 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TIMP4Q99727 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TIMP4Q99727 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TIMP4Q99727 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.62■■□□□ 1.05
TIMP4Q99727 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.62■■□□□ 1.05
TIMP4Q99727 AL451085.2-201ENST00000605085 799 ntBASIC21.62■■□□□ 1.05
TIMP4Q99727 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TIMP4Q99727 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TIMP4Q99727 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TIMP4Q99727 AC142381.3-201ENST00000568208 1670 ntBASIC21.61■■□□□ 1.05
TIMP4Q99727 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TIMP4Q99727 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.61■■□□□ 1.05
TIMP4Q99727 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.61■■□□□ 1.05
TIMP4Q99727 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TIMP4Q99727 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TIMP4Q99727 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TIMP4Q99727 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.6■■□□□ 1.05
TIMP4Q99727 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TIMP4Q99727 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TIMP4Q99727 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TIMP4Q99727 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.6■■□□□ 1.05
TIMP4Q99727 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.6■■□□□ 1.05
TIMP4Q99727 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.6■■□□□ 1.05
TIMP4Q99727 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TIMP4Q99727 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TIMP4Q99727 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP4Q99727 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP4Q99727 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP4Q99727 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP4Q99727 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.59■■□□□ 1.05
TIMP4Q99727 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TIMP4Q99727 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TIMP4Q99727 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.58■■□□□ 1.05
TIMP4Q99727 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TIMP4Q99727 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.58■■□□□ 1.05
TIMP4Q99727 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.58■■□□□ 1.04
TIMP4Q99727 AC138932.3-201ENST00000567634 1902 ntBASIC21.58■■□□□ 1.04
TIMP4Q99727 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TIMP4Q99727 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.58■■□□□ 1.04
TIMP4Q99727 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TIMP4Q99727 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TIMP4Q99727 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
TIMP4Q99727 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TIMP4Q99727 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP4Q99727 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TIMP4Q99727 AC022211.4-201ENST00000625094 2161 ntBASIC21.57■■□□□ 1.04
TIMP4Q99727 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP4Q99727 AL035685.1-201ENST00000636663 812 ntBASIC21.57■■□□□ 1.04
TIMP4Q99727 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TIMP4Q99727 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 AC103724.3-201ENST00000564481 992 ntBASIC21.56■■□□□ 1.04
TIMP4Q99727 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.56■■□□□ 1.04
TIMP4Q99727 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TIMP4Q99727 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP4Q99727 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP4Q99727 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP4Q99727 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.55■■□□□ 1.04
TIMP4Q99727 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TIMP4Q99727 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.55■■□□□ 1.04
TIMP4Q99727 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.55■■□□□ 1.04
TIMP4Q99727 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP4Q99727 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMP4Q99727 AC096887.2-201ENST00000623443 1957 ntBASIC21.54■■□□□ 1.04
TIMP4Q99727 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.54■■□□□ 1.04
TIMP4Q99727 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP4Q99727 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP4Q99727 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TIMP4Q99727 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.54■■□□□ 1.04
TIMP4Q99727 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
TIMP4Q99727 AL139125.2-201ENST00000623134 1869 ntBASIC21.54■■□□□ 1.04
TIMP4Q99727 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TIMP4Q99727 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TIMP4Q99727 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms