Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SDF2Q99470 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDF2Q99470 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDF2Q99470 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.85■■□□□ 1.09
SDF2Q99470 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.85■■□□□ 1.09
SDF2Q99470 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDF2Q99470 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SDF2Q99470 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SDF2Q99470 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.84■■□□□ 1.09
SDF2Q99470 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.84■■□□□ 1.09
SDF2Q99470 RPS2P7-201ENST00000447334 885 ntBASIC21.84■■□□□ 1.09
SDF2Q99470 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SDF2Q99470 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.84■■□□□ 1.09
SDF2Q99470 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SDF2Q99470 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
SDF2Q99470 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SDF2Q99470 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SDF2Q99470 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SDF2Q99470 DUX4L9-201ENST00000449051 1259 ntBASIC21.83■■□□□ 1.09
SDF2Q99470 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
SDF2Q99470 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SDF2Q99470 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SDF2Q99470 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SDF2Q99470 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF2Q99470 FOXO3B-201ENST00000395675 1928 ntBASIC21.82■■□□□ 1.08
SDF2Q99470 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF2Q99470 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF2Q99470 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.82■■□□□ 1.08
SDF2Q99470 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SDF2Q99470 ABHD17AP5-201ENST00000580133 923 ntBASIC21.82■■□□□ 1.08
SDF2Q99470 MIR6765-201ENST00000614092 87 ntBASIC21.82■■□□□ 1.08
SDF2Q99470 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.82■■□□□ 1.08
SDF2Q99470 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SDF2Q99470 AC093323.1-202ENST00000635031 2045 ntBASIC21.82■■□□□ 1.08
SDF2Q99470 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
SDF2Q99470 KRT18P60-201ENST00000312876 1297 ntBASIC21.81■■□□□ 1.08
SDF2Q99470 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SDF2Q99470 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.81■■□□□ 1.08
SDF2Q99470 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SDF2Q99470 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.81■■□□□ 1.08
SDF2Q99470 AC129492.7-201ENST00000622992 756 ntBASIC21.81■■□□□ 1.08
SDF2Q99470 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.81■■□□□ 1.08
SDF2Q99470 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SDF2Q99470 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.8■■□□□ 1.08
SDF2Q99470 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.8■■□□□ 1.08
SDF2Q99470 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.8■■□□□ 1.08
SDF2Q99470 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.8■■□□□ 1.08
SDF2Q99470 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.8■■□□□ 1.08
SDF2Q99470 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDF2Q99470 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDF2Q99470 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDF2Q99470 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.8■■□□□ 1.08
SDF2Q99470 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SDF2Q99470 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDF2Q99470 MIR6089-201ENST00000616698 64 ntBASIC21.8■■□□□ 1.08
SDF2Q99470 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDF2Q99470 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SDF2Q99470 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SDF2Q99470 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.79■■□□□ 1.08
SDF2Q99470 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.79■■□□□ 1.08
SDF2Q99470 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.79■■□□□ 1.08
SDF2Q99470 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.79■■□□□ 1.08
SDF2Q99470 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDF2Q99470 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.79■■□□□ 1.08
SDF2Q99470 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SDF2Q99470 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SDF2Q99470 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.78■■□□□ 1.08
SDF2Q99470 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.78■■□□□ 1.08
SDF2Q99470 AC087393.1-201ENST00000582896 145 ntBASIC21.78■■□□□ 1.08
SDF2Q99470 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.78■■□□□ 1.08
SDF2Q99470 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDF2Q99470 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
SDF2Q99470 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDF2Q99470 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SDF2Q99470 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SDF2Q99470 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SDF2Q99470 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF2Q99470 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF2Q99470 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SDF2Q99470 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SDF2Q99470 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.76■■□□□ 1.07
SDF2Q99470 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
SDF2Q99470 NTF6A-201ENST00000591175 560 ntBASIC21.76■■□□□ 1.07
SDF2Q99470 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SDF2Q99470 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SDF2Q99470 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SDF2Q99470 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.75■■□□□ 1.07
SDF2Q99470 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SDF2Q99470 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF2Q99470 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SDF2Q99470 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.74■■□□□ 1.07
SDF2Q99470 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF2Q99470 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.74■■□□□ 1.07
SDF2Q99470 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SDF2Q99470 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF2Q99470 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF2Q99470 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SDF2Q99470 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SDF2Q99470 LINC01124-201ENST00000409786 2117 ntBASIC21.73■■□□□ 1.07
SDF2Q99470 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms