Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PDLIM5Q96HC4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM5Q96HC4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.15■■□□□ 1.3
PDLIM5Q96HC4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.15■■□□□ 1.3
PDLIM5Q96HC4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM5Q96HC4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM5Q96HC4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM5Q96HC4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.15■■□□□ 1.3
PDLIM5Q96HC4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDLIM5Q96HC4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.14■■□□□ 1.29
PDLIM5Q96HC4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDLIM5Q96HC4 RPS2P7-201ENST00000447334 885 ntBASIC23.14■■□□□ 1.29
PDLIM5Q96HC4 U85056.1-201ENST00000616429 682 ntBASIC23.14■■□□□ 1.29
PDLIM5Q96HC4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDLIM5Q96HC4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.14■■□□□ 1.29
PDLIM5Q96HC4 FOXO3B-201ENST00000395675 1928 ntBASIC23.14■■□□□ 1.29
PDLIM5Q96HC4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDLIM5Q96HC4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.13■■□□□ 1.29
PDLIM5Q96HC4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.13■■□□□ 1.29
PDLIM5Q96HC4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.13■■□□□ 1.29
PDLIM5Q96HC4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.13■■□□□ 1.29
PDLIM5Q96HC4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.13■■□□□ 1.29
PDLIM5Q96HC4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDLIM5Q96HC4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.13■■□□□ 1.29
PDLIM5Q96HC4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.12■■□□□ 1.29
PDLIM5Q96HC4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM5Q96HC4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.12■■□□□ 1.29
PDLIM5Q96HC4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM5Q96HC4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PDLIM5Q96HC4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM5Q96HC4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM5Q96HC4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM5Q96HC4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM5Q96HC4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM5Q96HC4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.11■■□□□ 1.29
PDLIM5Q96HC4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PDLIM5Q96HC4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM5Q96HC4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM5Q96HC4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PDLIM5Q96HC4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.1■■□□□ 1.29
PDLIM5Q96HC4 AC087393.1-201ENST00000582896 145 ntBASIC23.1■■□□□ 1.29
PDLIM5Q96HC4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM5Q96HC4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.1■■□□□ 1.29
PDLIM5Q96HC4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.09■■□□□ 1.29
PDLIM5Q96HC4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDLIM5Q96HC4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PDLIM5Q96HC4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.09■■□□□ 1.29
PDLIM5Q96HC4 DUX4L9-201ENST00000449051 1259 ntBASIC23.09■■□□□ 1.29
PDLIM5Q96HC4 MIR6765-201ENST00000614092 87 ntBASIC23.09■■□□□ 1.29
PDLIM5Q96HC4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.09■■□□□ 1.29
PDLIM5Q96HC4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDLIM5Q96HC4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDLIM5Q96HC4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM5Q96HC4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM5Q96HC4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
PDLIM5Q96HC4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM5Q96HC4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDLIM5Q96HC4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.07■■□□□ 1.28
PDLIM5Q96HC4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM5Q96HC4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
PDLIM5Q96HC4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
PDLIM5Q96HC4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM5Q96HC4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM5Q96HC4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM5Q96HC4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM5Q96HC4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
PDLIM5Q96HC4 AC129492.7-201ENST00000622992 756 ntBASIC23.06■■□□□ 1.28
PDLIM5Q96HC4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM5Q96HC4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM5Q96HC4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.06■■□□□ 1.28
PDLIM5Q96HC4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM5Q96HC4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM5Q96HC4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.05■■□□□ 1.28
PDLIM5Q96HC4 KRT18P60-201ENST00000312876 1297 ntBASIC23.05■■□□□ 1.28
PDLIM5Q96HC4 ABHD17AP5-201ENST00000580133 923 ntBASIC23.05■■□□□ 1.28
PDLIM5Q96HC4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM5Q96HC4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM5Q96HC4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM5Q96HC4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM5Q96HC4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM5Q96HC4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM5Q96HC4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM5Q96HC4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM5Q96HC4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.04■■□□□ 1.28
PDLIM5Q96HC4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM5Q96HC4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.04■■□□□ 1.28
PDLIM5Q96HC4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDLIM5Q96HC4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.04■■□□□ 1.28
PDLIM5Q96HC4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM5Q96HC4 LINC00543-201ENST00000567234 1845 ntBASIC23.03■■□□□ 1.28
PDLIM5Q96HC4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM5Q96HC4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM5Q96HC4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.03■■□□□ 1.28
PDLIM5Q96HC4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.03■■□□□ 1.28
PDLIM5Q96HC4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDLIM5Q96HC4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDLIM5Q96HC4 AC141586.4-201ENST00000624558 1573 ntBASIC23.02■■□□□ 1.28
PDLIM5Q96HC4 LINC01124-201ENST00000409786 2117 ntBASIC23.02■■□□□ 1.28
PDLIM5Q96HC4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDLIM5Q96HC4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms