Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.6■■□□□ 1.21
CARFQ8N187 MIR4787-201ENST00000607364 84 ntBASIC22.6■■□□□ 1.21
CARFQ8N187 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CARFQ8N187 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CARFQ8N187 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CARFQ8N187 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CARFQ8N187 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CARFQ8N187 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CARFQ8N187 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CARFQ8N187 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.59■■□□□ 1.21
CARFQ8N187 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.59■■□□□ 1.21
CARFQ8N187 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CARFQ8N187 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
CARFQ8N187 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.58■■□□□ 1.21
CARFQ8N187 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CARFQ8N187 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CARFQ8N187 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.58■■□□□ 1.21
CARFQ8N187 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.58■■□□□ 1.2
CARFQ8N187 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CARFQ8N187 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.57■■□□□ 1.2
CARFQ8N187 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.57■■□□□ 1.2
CARFQ8N187 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
CARFQ8N187 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.57■■□□□ 1.2
CARFQ8N187 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CARFQ8N187 DUSP8P4-201ENST00000399538 1761 ntBASIC22.57■■□□□ 1.2
CARFQ8N187 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.57■■□□□ 1.2
CARFQ8N187 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.57■■□□□ 1.2
CARFQ8N187 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.56■■□□□ 1.2
CARFQ8N187 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.56■■□□□ 1.2
CARFQ8N187 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.56■■□□□ 1.2
CARFQ8N187 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CARFQ8N187 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CARFQ8N187 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CARFQ8N187 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CARFQ8N187 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CARFQ8N187 AC090877.2-201ENST00000558441 1738 ntBASIC22.55■■□□□ 1.2
CARFQ8N187 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CARFQ8N187 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.55■■□□□ 1.2
CARFQ8N187 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.55■■□□□ 1.2
CARFQ8N187 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CARFQ8N187 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CARFQ8N187 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.54■■□□□ 1.2
CARFQ8N187 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CARFQ8N187 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CARFQ8N187 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CARFQ8N187 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CARFQ8N187 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CARFQ8N187 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
CARFQ8N187 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CARFQ8N187 AL356441.2-201ENST00000443009 864 ntBASIC22.53■■□□□ 1.2
CARFQ8N187 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.53■■□□□ 1.2
CARFQ8N187 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.53■■□□□ 1.2
CARFQ8N187 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CARFQ8N187 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CARFQ8N187 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CARFQ8N187 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.52■■□□□ 1.2
CARFQ8N187 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.52■■□□□ 1.2
CARFQ8N187 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.52■■□□□ 1.2
CARFQ8N187 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.52■■□□□ 1.2
CARFQ8N187 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
CARFQ8N187 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CARFQ8N187 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CARFQ8N187 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CARFQ8N187 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
CARFQ8N187 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
CARFQ8N187 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.51■■□□□ 1.19
CARFQ8N187 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CARFQ8N187 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.51■■□□□ 1.19
CARFQ8N187 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CARFQ8N187 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.51■■□□□ 1.19
CARFQ8N187 AC092028.1-203ENST00000608262 953 ntBASIC22.51■■□□□ 1.19
CARFQ8N187 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CARFQ8N187 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CARFQ8N187 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
CARFQ8N187 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CARFQ8N187 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CARFQ8N187 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CARFQ8N187 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CARFQ8N187 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CARFQ8N187 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.5■■□□□ 1.19
CARFQ8N187 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CARFQ8N187 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
CARFQ8N187 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CARFQ8N187 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CARFQ8N187 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CARFQ8N187 AC145676.1-201ENST00000514988 2004 ntBASIC22.5■■□□□ 1.19
CARFQ8N187 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.49■■□□□ 1.19
CARFQ8N187 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CARFQ8N187 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.49■■□□□ 1.19
CARFQ8N187 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CARFQ8N187 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CARFQ8N187 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CARFQ8N187 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CARFQ8N187 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.49■■□□□ 1.19
CARFQ8N187 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CARFQ8N187 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CARFQ8N187 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CARFQ8N187 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CARFQ8N187 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
CARFQ8N187 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms