Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 DUX4L21-201ENST00000622058 1269 ntBASIC23.4■■□□□ 1.34
TRIM42Q8IWZ5 DUX4L10-201ENST00000622460 1267 ntBASIC23.4■■□□□ 1.34
TRIM42Q8IWZ5 DUX4L25-201ENST00000624915 1269 ntBASIC23.4■■□□□ 1.34
TRIM42Q8IWZ5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM42Q8IWZ5 DUSP8P5-201ENST00000422884 1815 ntBASIC23.4■■□□□ 1.34
TRIM42Q8IWZ5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM42Q8IWZ5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM42Q8IWZ5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM42Q8IWZ5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM42Q8IWZ5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.39■■□□□ 1.34
TRIM42Q8IWZ5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TRIM42Q8IWZ5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TRIM42Q8IWZ5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.39■■□□□ 1.33
TRIM42Q8IWZ5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.39■■□□□ 1.33
TRIM42Q8IWZ5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
TRIM42Q8IWZ5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM42Q8IWZ5 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM42Q8IWZ5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM42Q8IWZ5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM42Q8IWZ5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM42Q8IWZ5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM42Q8IWZ5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TRIM42Q8IWZ5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM42Q8IWZ5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM42Q8IWZ5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 HLA-V-202ENST00000446817 847 ntBASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.37■■□□□ 1.33
TRIM42Q8IWZ5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM42Q8IWZ5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM42Q8IWZ5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM42Q8IWZ5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
TRIM42Q8IWZ5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.36■■□□□ 1.33
TRIM42Q8IWZ5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
TRIM42Q8IWZ5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM42Q8IWZ5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM42Q8IWZ5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM42Q8IWZ5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM42Q8IWZ5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TRIM42Q8IWZ5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM42Q8IWZ5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 MIR3648-2-201ENST00000581792 180 ntBASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 MIR3648-1-201ENST00000615959 180 ntBASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
TRIM42Q8IWZ5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM42Q8IWZ5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM42Q8IWZ5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM42Q8IWZ5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.33■■□□□ 1.33
TRIM42Q8IWZ5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM42Q8IWZ5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.33■■□□□ 1.33
TRIM42Q8IWZ5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
TRIM42Q8IWZ5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM42Q8IWZ5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM42Q8IWZ5 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM42Q8IWZ5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM42Q8IWZ5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM42Q8IWZ5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM42Q8IWZ5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM42Q8IWZ5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM42Q8IWZ5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM42Q8IWZ5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
TRIM42Q8IWZ5 AC126177.7-201ENST00000547904 679 ntBASIC23.31■■□□□ 1.32
TRIM42Q8IWZ5 AC079834.2-201ENST00000609776 1949 ntBASIC23.31■■□□□ 1.32
TRIM42Q8IWZ5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM42Q8IWZ5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
TRIM42Q8IWZ5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 AC016575.1-201ENST00000607026 382 ntBASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM42Q8IWZ5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM42Q8IWZ5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM42Q8IWZ5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms