Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
EFNB3Q15768 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFNB3Q15768 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
EFNB3Q15768 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFNB3Q15768 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFNB3Q15768 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFNB3Q15768 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFNB3Q15768 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFNB3Q15768 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EFNB3Q15768 KRT125P-201ENST00000546827 989 ntBASIC20.19■□□□□ 0.82
EFNB3Q15768 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.19■□□□□ 0.82
EFNB3Q15768 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFNB3Q15768 AC097639.1-201ENST00000565519 1891 ntBASIC20.19■□□□□ 0.82
EFNB3Q15768 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFNB3Q15768 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.18■□□□□ 0.82
EFNB3Q15768 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
EFNB3Q15768 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFNB3Q15768 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
EFNB3Q15768 AC092803.2-201ENST00000564287 1899 ntBASIC20.18■□□□□ 0.82
EFNB3Q15768 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
EFNB3Q15768 FOXO3B-201ENST00000395675 1928 ntBASIC20.17■□□□□ 0.82
EFNB3Q15768 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EFNB3Q15768 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFNB3Q15768 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFNB3Q15768 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
EFNB3Q15768 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFNB3Q15768 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
EFNB3Q15768 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
EFNB3Q15768 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.17■□□□□ 0.82
EFNB3Q15768 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFNB3Q15768 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.17■□□□□ 0.82
EFNB3Q15768 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EFNB3Q15768 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFNB3Q15768 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFNB3Q15768 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
EFNB3Q15768 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFNB3Q15768 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.16■□□□□ 0.82
EFNB3Q15768 MIR4281-201ENST00000580852 62 ntBASIC20.16■□□□□ 0.82
EFNB3Q15768 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EFNB3Q15768 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFNB3Q15768 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFNB3Q15768 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFNB3Q15768 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFNB3Q15768 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFNB3Q15768 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
EFNB3Q15768 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFNB3Q15768 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EFNB3Q15768 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFNB3Q15768 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFNB3Q15768 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EFNB3Q15768 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.14■□□□□ 0.81
EFNB3Q15768 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.14■□□□□ 0.81
EFNB3Q15768 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.14■□□□□ 0.81
EFNB3Q15768 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFNB3Q15768 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EFNB3Q15768 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
EFNB3Q15768 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFNB3Q15768 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFNB3Q15768 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFNB3Q15768 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EFNB3Q15768 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFNB3Q15768 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.13■□□□□ 0.81
EFNB3Q15768 MIR4787-201ENST00000607364 84 ntBASIC20.13■□□□□ 0.81
EFNB3Q15768 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.13■□□□□ 0.81
EFNB3Q15768 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFNB3Q15768 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EFNB3Q15768 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.12■□□□□ 0.81
EFNB3Q15768 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EFNB3Q15768 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EFNB3Q15768 AC021242.3-201ENST00000607598 1377 ntBASIC20.12■□□□□ 0.81
EFNB3Q15768 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
EFNB3Q15768 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EFNB3Q15768 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.11■□□□□ 0.81
EFNB3Q15768 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.11■□□□□ 0.81
EFNB3Q15768 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
EFNB3Q15768 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.11■□□□□ 0.81
EFNB3Q15768 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.11■□□□□ 0.81
EFNB3Q15768 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.1■□□□□ 0.81
EFNB3Q15768 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EFNB3Q15768 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.1■□□□□ 0.81
EFNB3Q15768 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.1■□□□□ 0.81
EFNB3Q15768 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.1■□□□□ 0.81
EFNB3Q15768 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EFNB3Q15768 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
EFNB3Q15768 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EFNB3Q15768 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.09■□□□□ 0.81
EFNB3Q15768 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EFNB3Q15768 AL356441.2-201ENST00000443009 864 ntBASIC20.09■□□□□ 0.81
EFNB3Q15768 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
EFNB3Q15768 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.09■□□□□ 0.81
EFNB3Q15768 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.09■□□□□ 0.81
EFNB3Q15768 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EFNB3Q15768 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.09■□□□□ 0.81
EFNB3Q15768 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.08■□□□□ 0.81
EFNB3Q15768 AC135731.1-201ENST00000569415 2548 ntBASIC20.08■□□□□ 0.81
EFNB3Q15768 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EFNB3Q15768 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EFNB3Q15768 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.08■□□□□ 0.81
EFNB3Q15768 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
EFNB3Q15768 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms