Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2NP61088 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2NP61088 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.71■□□□□ 0.91
UBE2NP61088 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.71■□□□□ 0.91
UBE2NP61088 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2NP61088 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UBE2NP61088 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.7■□□□□ 0.91
UBE2NP61088 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UBE2NP61088 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2NP61088 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.7■□□□□ 0.9
UBE2NP61088 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
UBE2NP61088 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2NP61088 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
UBE2NP61088 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2NP61088 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UBE2NP61088 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2NP61088 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
UBE2NP61088 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2NP61088 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.69■□□□□ 0.9
UBE2NP61088 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UBE2NP61088 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2NP61088 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2NP61088 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2NP61088 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
UBE2NP61088 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBE2NP61088 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.68■□□□□ 0.9
UBE2NP61088 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2NP61088 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2NP61088 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.67■□□□□ 0.9
UBE2NP61088 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2NP61088 FOXO3B-201ENST00000395675 1928 ntBASIC20.67■□□□□ 0.9
UBE2NP61088 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2NP61088 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
UBE2NP61088 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2NP61088 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2NP61088 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2NP61088 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2NP61088 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2NP61088 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBE2NP61088 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2NP61088 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBE2NP61088 AC103834.1-201ENST00000520383 144 ntBASIC20.66■□□□□ 0.9
UBE2NP61088 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.66■□□□□ 0.9
UBE2NP61088 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2NP61088 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2NP61088 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2NP61088 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2NP61088 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2NP61088 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2NP61088 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2NP61088 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
UBE2NP61088 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.65■□□□□ 0.9
UBE2NP61088 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBE2NP61088 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBE2NP61088 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
UBE2NP61088 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.64■□□□□ 0.9
UBE2NP61088 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
UBE2NP61088 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE2NP61088 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.64■□□□□ 0.89
UBE2NP61088 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.64■□□□□ 0.89
UBE2NP61088 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
UBE2NP61088 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2NP61088 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2NP61088 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2NP61088 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE2NP61088 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
UBE2NP61088 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.63■□□□□ 0.89
UBE2NP61088 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE2NP61088 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.62■□□□□ 0.89
UBE2NP61088 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.62■□□□□ 0.89
UBE2NP61088 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2NP61088 AL031848.2-201ENST00000607670 837 ntBASIC20.62■□□□□ 0.89
UBE2NP61088 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2NP61088 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE2NP61088 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2NP61088 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
UBE2NP61088 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2NP61088 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.61■□□□□ 0.89
UBE2NP61088 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.61■□□□□ 0.89
UBE2NP61088 AC103724.3-201ENST00000564481 992 ntBASIC20.61■□□□□ 0.89
UBE2NP61088 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2NP61088 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.61■□□□□ 0.89
UBE2NP61088 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2NP61088 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2NP61088 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2NP61088 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2NP61088 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2NP61088 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2NP61088 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
UBE2NP61088 THA1P-201ENST00000590384 1145 ntBASIC20.6■□□□□ 0.89
UBE2NP61088 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2NP61088 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.59■□□□□ 0.89
UBE2NP61088 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2NP61088 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2NP61088 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.59■□□□□ 0.89
UBE2NP61088 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
UBE2NP61088 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.59■□□□□ 0.89
UBE2NP61088 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2NP61088 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
UBE2NP61088 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms