Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 AL035685.1-201ENST00000636663 812 ntBASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.99■■□□□ 1.91
SPDYE3A6NKU9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 KRT18P24-201ENST00000344739 1156 ntBASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 AC009299.2-201ENST00000482477 511 ntBASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 THA1P-201ENST00000590384 1145 ntBASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
SPDYE3A6NKU9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SPDYE3A6NKU9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.97■■□□□ 1.91
SPDYE3A6NKU9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SPDYE3A6NKU9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.97■■□□□ 1.91
SPDYE3A6NKU9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
SPDYE3A6NKU9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SPDYE3A6NKU9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SPDYE3A6NKU9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.96■■□□□ 1.91
SPDYE3A6NKU9 AC120024.1-201ENST00000562672 995 ntBASIC26.96■■□□□ 1.91
SPDYE3A6NKU9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
SPDYE3A6NKU9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
SPDYE3A6NKU9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SPDYE3A6NKU9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SPDYE3A6NKU9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.95■■□□□ 1.9
SPDYE3A6NKU9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SPDYE3A6NKU9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
SPDYE3A6NKU9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.93■■□□□ 1.9
SPDYE3A6NKU9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPDYE3A6NKU9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPDYE3A6NKU9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPDYE3A6NKU9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
SPDYE3A6NKU9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SPDYE3A6NKU9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 AC011551.1-201ENST00000614101 683 ntBASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SPDYE3A6NKU9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SPDYE3A6NKU9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.9■■□□□ 1.9
SPDYE3A6NKU9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.9■■□□□ 1.9
SPDYE3A6NKU9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SPDYE3A6NKU9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.89■■□□□ 1.9
SPDYE3A6NKU9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SPDYE3A6NKU9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.89■■□□□ 1.9
SPDYE3A6NKU9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
SPDYE3A6NKU9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.89■■□□□ 1.9
SPDYE3A6NKU9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SPDYE3A6NKU9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SPDYE3A6NKU9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SPDYE3A6NKU9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SPDYE3A6NKU9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.87■■□□□ 1.89
SPDYE3A6NKU9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
SPDYE3A6NKU9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SPDYE3A6NKU9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.86■■□□□ 1.89
SPDYE3A6NKU9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.86■■□□□ 1.89
SPDYE3A6NKU9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SPDYE3A6NKU9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.85■■□□□ 1.89
SPDYE3A6NKU9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SPDYE3A6NKU9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SPDYE3A6NKU9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.85■■□□□ 1.89
SPDYE3A6NKU9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
SPDYE3A6NKU9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPDYE3A6NKU9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPDYE3A6NKU9 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.84■■□□□ 1.89
SPDYE3A6NKU9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SPDYE3A6NKU9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
SPDYE3A6NKU9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 MIR4281-201ENST00000580852 62 ntBASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SPDYE3A6NKU9 SLC6A10P-202ENST00000431994 2058 ntBASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms