Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC010501.1-201ENST00000606270 1962 ntBASIC20.97■□□□□ 0.95
MBD3L4A6NDZ8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3L4A6NDZ8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3L4A6NDZ8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
MBD3L4A6NDZ8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.97■□□□□ 0.95
MBD3L4A6NDZ8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 AL121749.1-202ENST00000609313 2153 ntBASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 AC092028.1-203ENST00000608262 953 ntBASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
MBD3L4A6NDZ8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD3L4A6NDZ8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3L4A6NDZ8 KRT16P3-201ENST00000439127 1283 ntBASIC20.95■□□□□ 0.94
MBD3L4A6NDZ8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3L4A6NDZ8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.95■□□□□ 0.94
MBD3L4A6NDZ8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3L4A6NDZ8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3L4A6NDZ8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3L4A6NDZ8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
MBD3L4A6NDZ8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MBD3L4A6NDZ8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3L4A6NDZ8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.94■□□□□ 0.94
MBD3L4A6NDZ8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD3L4A6NDZ8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD3L4A6NDZ8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.94■□□□□ 0.94
MBD3L4A6NDZ8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3L4A6NDZ8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MBD3L4A6NDZ8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
MBD3L4A6NDZ8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3L4A6NDZ8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3L4A6NDZ8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3L4A6NDZ8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3L4A6NDZ8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD3L4A6NDZ8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD3L4A6NDZ8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD3L4A6NDZ8 TSPY9P-201ENST00000440215 945 ntBASIC20.92■□□□□ 0.94
MBD3L4A6NDZ8 TSPY11P-201ENST00000442607 1045 ntBASIC20.92■□□□□ 0.94
MBD3L4A6NDZ8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MBD3L4A6NDZ8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.92■□□□□ 0.94
MBD3L4A6NDZ8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD3L4A6NDZ8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MBD3L4A6NDZ8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MBD3L4A6NDZ8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MBD3L4A6NDZ8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MBD3L4A6NDZ8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.91■□□□□ 0.94
MBD3L4A6NDZ8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.91■□□□□ 0.94
MBD3L4A6NDZ8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.91■□□□□ 0.94
MBD3L4A6NDZ8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.91■□□□□ 0.94
MBD3L4A6NDZ8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD3L4A6NDZ8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD3L4A6NDZ8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.9■□□□□ 0.94
MBD3L4A6NDZ8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD3L4A6NDZ8 AC092803.2-201ENST00000564287 1899 ntBASIC20.9■□□□□ 0.94
MBD3L4A6NDZ8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MBD3L4A6NDZ8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD3L4A6NDZ8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.9■□□□□ 0.94
MBD3L4A6NDZ8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
MBD3L4A6NDZ8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.9■□□□□ 0.94
MBD3L4A6NDZ8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MBD3L4A6NDZ8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.89■□□□□ 0.93
MBD3L4A6NDZ8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.89■□□□□ 0.93
MBD3L4A6NDZ8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MBD3L4A6NDZ8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MBD3L4A6NDZ8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.89■□□□□ 0.93
MBD3L4A6NDZ8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 AC090877.2-201ENST00000558441 1738 ntBASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MBD3L4A6NDZ8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 AF131216.4-201ENST00000638924 1588 ntBASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.87■□□□□ 0.93
MBD3L4A6NDZ8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.86■□□□□ 0.93
MBD3L4A6NDZ8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
MBD3L4A6NDZ8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms