Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 AC022211.4-201ENST00000625094 2161 ntBASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCRBV4S1A1TA0A5B7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV4S1A1TA0A5B7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV4S1A1TA0A5B7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV4S1A1TA0A5B7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TCRBV4S1A1TA0A5B7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TCRBV4S1A1TA0A5B7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.87■□□□□ 0.61
TCRBV4S1A1TA0A5B7 AC096887.2-201ENST00000623443 1957 ntBASIC18.87■□□□□ 0.61
TCRBV4S1A1TA0A5B7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TCRBV4S1A1TA0A5B7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV4S1A1TA0A5B7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.86■□□□□ 0.61
TCRBV4S1A1TA0A5B7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV4S1A1TA0A5B7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.86■□□□□ 0.61
TCRBV4S1A1TA0A5B7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCRBV4S1A1TA0A5B7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.85■□□□□ 0.61
TCRBV4S1A1TA0A5B7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV4S1A1TA0A5B7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV4S1A1TA0A5B7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV4S1A1TA0A5B7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TCRBV4S1A1TA0A5B7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV4S1A1TA0A5B7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV4S1A1TA0A5B7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCRBV4S1A1TA0A5B7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.85■□□□□ 0.61
TCRBV4S1A1TA0A5B7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV4S1A1TA0A5B7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV4S1A1TA0A5B7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV4S1A1TA0A5B7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TCRBV4S1A1TA0A5B7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV4S1A1TA0A5B7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.84■□□□□ 0.61
TCRBV4S1A1TA0A5B7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV4S1A1TA0A5B7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.84■□□□□ 0.61
TCRBV4S1A1TA0A5B7 AC138932.3-201ENST00000567634 1902 ntBASIC18.84■□□□□ 0.61
TCRBV4S1A1TA0A5B7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TCRBV4S1A1TA0A5B7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TCRBV4S1A1TA0A5B7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TCRBV4S1A1TA0A5B7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TCRBV4S1A1TA0A5B7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TCRBV4S1A1TA0A5B7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV4S1A1TA0A5B7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV4S1A1TA0A5B7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.83■□□□□ 0.6
TCRBV4S1A1TA0A5B7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
TCRBV4S1A1TA0A5B7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.83■□□□□ 0.6
TCRBV4S1A1TA0A5B7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.83■□□□□ 0.6
TCRBV4S1A1TA0A5B7 AL451085.2-201ENST00000605085 799 ntBASIC18.83■□□□□ 0.6
TCRBV4S1A1TA0A5B7 PVT1_1.1-201ENST00000615125 194 ntBASIC18.83■□□□□ 0.6
TCRBV4S1A1TA0A5B7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TCRBV4S1A1TA0A5B7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TCRBV4S1A1TA0A5B7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV4S1A1TA0A5B7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV4S1A1TA0A5B7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.82■□□□□ 0.6
TCRBV4S1A1TA0A5B7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.82■□□□□ 0.6
TCRBV4S1A1TA0A5B7 AL035685.1-201ENST00000636663 812 ntBASIC18.82■□□□□ 0.6
TCRBV4S1A1TA0A5B7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV4S1A1TA0A5B7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV4S1A1TA0A5B7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
TCRBV4S1A1TA0A5B7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV4S1A1TA0A5B7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TCRBV4S1A1TA0A5B7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV4S1A1TA0A5B7 KRT18P10-201ENST00000388836 1287 ntBASIC18.81■□□□□ 0.6
TCRBV4S1A1TA0A5B7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.81■□□□□ 0.6
TCRBV4S1A1TA0A5B7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV4S1A1TA0A5B7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TCRBV4S1A1TA0A5B7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV4S1A1TA0A5B7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.81■□□□□ 0.6
TCRBV4S1A1TA0A5B7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 RPS2P7-201ENST00000447334 885 ntBASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 AC103834.1-201ENST00000520383 144 ntBASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 AC087393.1-201ENST00000582896 145 ntBASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV4S1A1TA0A5B7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 AL139125.2-201ENST00000623134 1869 ntBASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV4S1A1TA0A5B7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms